Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_B17
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    29   6.0  
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
 Frame = +1

Query: 640 KAVXRLSPESRG*PRKXHVTQRPXKGQX-PXKGXVXGVFPXAXRPP*QTXXKTQPPXSKG 816
           K V + +P  +  P K  V Q P +    P K       P    PP     + Q P  + 
Sbjct: 297 KPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVVQQ 356

Query: 817 XPTPXXTYKXPGXSPEXXXPSR 882
            P P      P  +P+   P R
Sbjct: 357 APAPPVQQAPPKPTPQQAPPVR 378


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 79  SIQLNWIASLLLTITRK*SASVSLKYGIYFCYRSDK*CNVKKYIVIHIFLF 231
           S   NWI +L++++T    +  + KYG +F Y     C      ++ +F F
Sbjct: 510 STACNWIFNLIVSLTFLSLSQAATKYGTFFIY-----CGCTMVALVFVFFF 555


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,779,150
Number of Sequences: 27780
Number of extensions: 184504
Number of successful extensions: 307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)