Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_B16
         (992 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.80 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   5.7  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   5.7  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.7  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    23   5.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.5  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.80
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 443 PPPPXPXPPPP 475
           PP P P PPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 24.2 bits (50), Expect = 1.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 447 PPPXXPPPPXPCAXG 491
           PP   PPPP P + G
Sbjct: 338 PPKPAPPPPPPSSSG 352



 Score = 22.2 bits (45), Expect = 7.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 918 PPPPXPPPRXAXP 956
           P PP PPP  + P
Sbjct: 341 PAPPPPPPSSSGP 353


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
 Frame = +2

Query: 683 SXXPRPXPXP---PRPXXXXAPPPP--XXPXNXPPRXPP 784
           S  P P P P   P+     +PP P    P   PP  PP
Sbjct: 18  SGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 423 APKKXXGPPPPXXPPPPXP 479
           AP++   P P   PPP  P
Sbjct: 33  APQRGSPPNPSQGPPPGGP 51


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 918  PPPPXPPP 941
            PPPP PPP
Sbjct: 1355 PPPPPPPP 1362


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 50  PQPRPPHPRLRREAEPEAEPGNNRP 74



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 190 PQPRPPHPRLRREAEPEAEPGNNRP 214



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 218 PQPRPPHPRLRREAEPEAEPGNNRP 242



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 246 PQPRPPHPRLRREAKPEAKPGNNRP 270


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 51  PQPRPPHPRLRREAEPEAEPGNNRP 75



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 79  PQPRPPHPRLRREAEPEAEPGNNRP 103



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 107 PQPRPPHPRLRREAEPEAEPGNNRP 131


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 51  PQPRPPHPRLRREAEPKAEPGNNRP 75


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 22  PQPRPPHPRLRREAEPEAEPGNNRP 46



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 50  PQPRPPHPRLRREAEPEAEPGNNRP 74



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 78  PQPRPPHPRLRREAEPEAEPGNNRP 102



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 106 PQPRPPHPRLRREAEPEAEPGNNRP 130



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 134 PQPRPPHPRLRREAKPEAEPGNNRP 158



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 698 PXPXPPRPXXXXAPPPPXXPXNXPP 772
           P P PP P       P   P N  P
Sbjct: 162 PQPRPPHPRLRREAEPEAEPGNNRP 186


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 241  GXPXXPPPPXKN 276
            G P  PPPP +N
Sbjct: 1855 GSPEPPPPPPRN 1866



 Score = 22.2 bits (45), Expect = 7.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 918  PPPPXPPPR 944
            P PP PPPR
Sbjct: 1857 PEPPPPPPR 1865


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.308    0.137    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,832
Number of Sequences: 438
Number of extensions: 5084
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32895408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)