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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_B12
         (923 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...   169   3e-42
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...   169   3e-42
Z81529-12|CAB04303.1|  492|Caenorhabditis elegans Hypothetical p...    34   0.17 
AL023816-5|CAA19434.1|  492|Caenorhabditis elegans Hypothetical ...    34   0.17 
Z81472-1|CAB03889.1|  173|Caenorhabditis elegans Hypothetical pr...    32   0.50 
U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical pr...    32   0.50 
L16559-6|AAA27931.1|  397|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical...    31   1.5  
AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical ...    31   1.5  
AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z81556-2|CAB04525.2|  445|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical ...    30   2.7  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    30   2.7  
AC084153-16|AAK84590.1|  233|Caenorhabditis elegans Hypothetical...    30   2.7  
U41026-2|AAM51523.1|  295|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   3.6  
Z48638-9|CAA88569.1|  202|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z49071-4|CAA88877.1|  166|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.     29   6.2  
AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated...    29   6.2  
AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated...    29   6.2  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    29   6.2  
Z72509-3|CAA96647.1|  129|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z71260-1|CAA95798.1|  744|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U60113-1|AAB03334.1|  715|Caenorhabditis elegans SEM-4 short for...    28   8.2  
U60112-1|AAB03333.1|  744|Caenorhabditis elegans SEM-4 long form...    28   8.2  
U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF026214-6|AAB71316.3|  875|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score =  169 bits (410), Expect = 3e-42
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = +2

Query: 200 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAXHFKCHICHKKLYTGPGLSIHCMQVHKE 379
           MGRKKKK  KPWCWYCNREFDDEKILIQHQKA HFKCHICHKKL++GPGLSIHCMQVHKE
Sbjct: 1   MGRKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE 60

Query: 380 AIDKVPNSLPNXSNIQIQIYGMEGIP 457
            IDK+P ++    NI ++IYGM+GIP
Sbjct: 61  TIDKIPAAVHGRDNIHVEIYGMQGIP 86


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score =  169 bits (410), Expect = 3e-42
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = +2

Query: 200 MGRKKKKASKPWCWYCNREFDDEKILIQHQKAXHFKCHICHKKLYTGPGLSIHCMQVHKE 379
           MGRKKKK  KPWCWYCNREFDDEKILIQHQKA HFKCHICHKKL++GPGLSIHCMQVHKE
Sbjct: 1   MGRKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE 60

Query: 380 AIDKVPNSLPNXSNIQIQIYGMEGIP 457
            IDK+P ++    NI ++IYGM+GIP
Sbjct: 61  TIDKIPAAVHGRDNIHVEIYGMQGIP 86


>Z81529-12|CAB04303.1|  492|Caenorhabditis elegans Hypothetical
           protein T05G11.1 protein.
          Length = 492

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXHFKCHIC 319
           C  C + F D++ L +H++  H  CH+C
Sbjct: 14  CGICGKYFSDDESLREHRRQRHMTCHMC 41



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXHF---KCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 406
           C +C ++F  E  L +H++  H     C +C++++     +  H    H   I KV N L
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHN--IKKVYNCL 238


>AL023816-5|CAA19434.1|  492|Caenorhabditis elegans Hypothetical
           protein T05G11.1 protein.
          Length = 492

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXHFKCHIC 319
           C  C + F D++ L +H++  H  CH+C
Sbjct: 14  CGICGKYFSDDESLREHRRQRHMTCHMC 41



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXHF---KCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 406
           C +C ++F  E  L +H++  H     C +C++++     +  H    H   I KV N L
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHN--IKKVYNCL 238


>Z81472-1|CAB03889.1|  173|Caenorhabditis elegans Hypothetical
           protein C16D6.1 protein.
          Length = 173

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
 Frame = +1

Query: 577 PFPPRPLAILPTPXGPPXRXV---SCHX*PXNPMMPPFHAGAPXLMMXRP*PPFVPXXP 744
           P PP  L  LP P  PP   +        P  P+ PP  AG P     RP PP  P  P
Sbjct: 77  PPPPHLLHALPHPAYPPGHPLHMPGMTMMPMGPVGPPMMAGMP----MRPMPPLPPMTP 131


>U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical
           protein C52E12.1 protein.
          Length = 925

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 230 PWCWYCNREFDDEKILIQHQKAXHFKCHIC 319
           P C +C ++F DE+   +H +  HF C  C
Sbjct: 255 PQCLFCEQKFLDEENRYRHLRKDHFFCQFC 284


>L16559-6|AAA27931.1|  397|Caenorhabditis elegans Hypothetical
           protein C06E1.8 protein.
          Length = 397

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXHF---KCHICHKKLYTGPGLSIHCMQVH 373
           C  C++ F     L +H+   HF   KC +C K + +   L  H  + H
Sbjct: 53  CSICSKVFCHSSSLSRHRMQAHFKSYKCTVCRKDISSSESLRTHMFKQH 101


>AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10b protein.
          Length = 312

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH-----FKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPN 400
           C  C + F     L  H+   H     F+C ICHK       L  H  +VH++   K  +
Sbjct: 241 CIECGKRFTTVTALSTHKARVHSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRS 300

Query: 401 SL 406
           +L
Sbjct: 301 AL 302


>AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10a protein.
          Length = 430

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH-----FKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPN 400
           C  C + F     L  H+   H     F+C ICHK       L  H  +VH++   K  +
Sbjct: 359 CIECGKRFTTVTALSTHKARVHSQSNRFECTICHKSYPVPSELRKHIKRVHEKDAPKSRS 418

Query: 401 SL 406
           +L
Sbjct: 419 AL 420


>AC025721-2|AAK29901.3|  976|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.10 protein.
          Length = 976

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 14/74 (18%)
 Frame = +2

Query: 203 GRKKKKASKPWCWYCNREFDDEKILIQHQ----KAXH----------FKCHICHKKLYTG 340
           G+K  +  K  C YCN+ F     L +H     +A H          +KC IC K+    
Sbjct: 281 GKKPVREKKNVCPYCNKAFVRPAELARHSFVHLRAKHLQSSSTEIPKWKCAICFKEYAHQ 340

Query: 341 PGLSIHCMQVHKEA 382
            GLS H   VH  A
Sbjct: 341 AGLSEHKRTVHGNA 354


>Z81556-2|CAB04525.2|  445|Caenorhabditis elegans Hypothetical
           protein F58G1.2 protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH-----FKCHICHKKLYTGPGLSIH 358
           C  CN++F   + L +H+K  H     F+CH C +   +   ++IH
Sbjct: 317 CPDCNQKFLTPRKLRKHRKMAHVFSRTFQCHFCEEFFISDTAVTIH 362


>AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical
           protein Y67H2A.10 protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 302 FKCHICHKKLYTGPGLSIHCMQVHKEAID 388
           +KC  C K+  T  GLS H M  H++  D
Sbjct: 271 YKCTYCSKRYKTSSGLSNHMMSSHQKISD 299


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -1

Query: 923 GGGGWX*GXGRGGG 882
           GGGGW  G GRGGG
Sbjct: 53  GGGGWGRGGGRGGG 66


>AC084153-16|AAK84590.1|  233|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.16 protein.
          Length = 233

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +2

Query: 218 KASKPWCWYCNREFDDEKILIQHQKAXH---FKCHICHKKLYTGPGLSIHCMQVH 373
           KA +  C  C + FD  + L +H+   H   F C+ C KK  +   L+ H    H
Sbjct: 51  KAPQFNCRQCRKAFDSIRELAEHEIKNHEDQFNCYHCDKKSESIERLAAHTAHRH 105


>U41026-2|AAM51523.1|  295|Caenorhabditis elegans Hypothetical
           protein C28G1.6 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/59 (23%), Positives = 24/59 (40%)
 Frame = +2

Query: 230 PWCWYCNREFDDEKILIQHQKAXHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 406
           P C  C   +  E  + ++    H  C +C  KL+  P +     +   E  D+  N+L
Sbjct: 4   PTCEICEESYRSESRIPKNLNCGHVICPVCASKLFENPEVKCPTCRQPIEVKDRDVNNL 62


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/62 (30%), Positives = 22/62 (35%)
 Frame = +1

Query: 571 CTPFPPRPLAILPTPXGPPXRXVSCHX*PXNPMMPPFHAGAPXLMMXRP*PPFVPXXPXA 750
           C P PP P+   P    PP         P  PM PP     P  M   P PP     P  
Sbjct: 30  CPP-PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQ 88

Query: 751 AH 756
           ++
Sbjct: 89  SY 90


>Z48638-9|CAA88569.1|  202|Caenorhabditis elegans Hypothetical
           protein ZK892.7 protein.
          Length = 202

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 218 KASKPWCWYCNREFDDEKILIQHQKAXHFKCHIC 319
           K+  P C YC   F     + +H+   H K H C
Sbjct: 8   KSEAPICGYCQLTFSQTGSMTRHRDRLHTKNHTC 41


>Z49071-4|CAA88877.1|  166|Caenorhabditis elegans Hypothetical
           protein T22C8.5 protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
 Frame = +2

Query: 209 KKKKASKPW-C-WY-CNREFDDEKILIQHQ----KAXHFKCHICHKKLYTGPGLSIHCMQ 367
           +K    +P+ C W+ C + FD    LI+H+    K   F C  C ++      L  H   
Sbjct: 99  RKHTGDRPFVCDWFDCGKRFDRSDQLIRHKRTHTKEYRFACKFCIRQFSRSDHLQQHLTS 158

Query: 368 VH 373
           VH
Sbjct: 159 VH 160


>AF535160-1|AAN33048.1|  468|Caenorhabditis elegans UNC-34 protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = +1

Query: 577 PFPPRPLA--ILPTPXGPPX-----RXVSCHX*PXNPMMPPFHAGAP 696
           P PP PL   I   P  PP        V+ H  P  P +PP  AGAP
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAP 247


>AC025722-6|AAO12398.1|  310|Caenorhabditis elegans Uncoordinated
           protein 34, isoform b protein.
          Length = 310

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = +1

Query: 577 PFPPRPLA--ILPTPXGPPX-----RXVSCHX*PXNPMMPPFHAGAP 696
           P PP PL   I   P  PP        V+ H  P  P +PP  AGAP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAP 233


>AC025722-5|AAO12397.1|  454|Caenorhabditis elegans Uncoordinated
           protein 34, isoform a protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = +1

Query: 577 PFPPRPLA--ILPTPXGPPX-----RXVSCHX*PXNPMMPPFHAGAP 696
           P PP PL   I   P  PP        V+ H  P  P +PP  AGAP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAP 233


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +2

Query: 551 PTPXLLGARPSPPVPWRYCPHXGAPPPGMYP 643
           P P   G  P PP      P  GAP  G YP
Sbjct: 44  PAPACGGGAPPPPAYAAPAPSYGAPAGGAYP 74


>Z72509-3|CAA96647.1|  129|Caenorhabditis elegans Hypothetical
           protein F32G8.3 protein.
          Length = 129

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = -2

Query: 631 WXGGPXVWAISPGDGGGRACTQQXW----SRXXXGXLXXHXXCQTXGLHXIFVWSCSFTS 464
           W GGP  W   PG        Q+ W    +R           CQT G++ I +   S+ +
Sbjct: 32  WGGGPGGWGGGPGGWQQPGFQQKNWNKNMNRNHIAAKQDQYNCQTSGINLIGLPISSY-N 90

Query: 463 CR 458
           CR
Sbjct: 91  CR 92


>Z71260-1|CAA95798.1|  744|Caenorhabditis elegans Hypothetical
           protein F15C11.1 protein.
          Length = 744

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH----FKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVP 397
           C  C R    +  L  H +       FKC IC +   T   L  H M VH  K +   +P
Sbjct: 307 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 365

Query: 398 NSLP 409
            SLP
Sbjct: 366 ISLP 369


>U60113-1|AAB03334.1|  715|Caenorhabditis elegans SEM-4 short form
           protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH----FKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVP 397
           C  C R    +  L  H +       FKC IC +   T   L  H M VH  K +   +P
Sbjct: 278 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 336

Query: 398 NSLP 409
            SLP
Sbjct: 337 ISLP 340


>U60112-1|AAB03333.1|  744|Caenorhabditis elegans SEM-4 long form
           protein.
          Length = 744

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH----FKCHICHKKLYTGPGLSIHCMQVH--KEAIDKVP 397
           C  C R    +  L  H +       FKC IC +   T   L  H M VH  K +   +P
Sbjct: 307 CILCRRVLSCKSALQMHYRTHTGERPFKCKICQRAFTTKGNLKTH-MGVHRSKHSFRGLP 365

Query: 398 NSLP 409
            SLP
Sbjct: 366 ISLP 369


>U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical
           protein F53B3.1 protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
 Frame = +2

Query: 236 CWYCNREFDDEKILIQHQKAXH-----FKCHICHK 325
           C +CN +F   + L +H+K  H     F+CH C +
Sbjct: 415 CSFCNMKFLTPRKLRKHKKMSHVFTKTFQCHFCEE 449


>U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical
           protein F56D1.1 protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = +2

Query: 245 CNREFDDEKILIQHQKAXH----FKCHICHKKLYTGPGLSIHCMQVHKEAI 385
           C + F  E+ L  H         + CH C++K +     ++H  + H+ +I
Sbjct: 406 CGKTFRTEQALHDHFNVHDGIKPYSCHTCNQKFHARDRFAVHLSKYHQTSI 456


>AF026214-6|AAB71316.3|  875|Caenorhabditis elegans Hypothetical
           protein F52H2.7 protein.
          Length = 875

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 203 GRKKKKASKPWCWYCNREFDDEKILIQHQKAXHFKCHICHKKLYT 337
           GR+K+  S P  + CN+          H  +    C  C KK +T
Sbjct: 404 GREKRSDSAPRAFRCNQFHSPSHETKYHSPSKVLPCSYCKKKTFT 448


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,175,589
Number of Sequences: 27780
Number of extensions: 365036
Number of successful extensions: 1702
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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