Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_B11
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988...    32   0.53 
03_06_0471 + 34169562-34169892,34170121-34170347                       31   0.93 
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           31   1.6  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    30   2.1  
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152...    30   2.1  
02_04_0382 - 22501041-22501279,22501717-22501810                       29   4.9  
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225           29   4.9  

>05_05_0156 + 22792783-22793410,22797153-22797227,22797644-22798879,
            22798947-22799155,22799240-22800209,22800395-22800465
          Length = 1062

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = -1

Query: 231  AVSIRVVVFGRINDVRAVVNRFVAVSLSVGHSQQSEDENHEEFHFYMITSYHRRK 67
            A  I  +++G ++D     ++F+ +S       QS+DEN +  H  +  +YH +K
Sbjct: 985  ACDIIRILYGEVHDHSPFDDKFLPLSFDAQIDSQSDDENDKSGHGRIKGNYHSKK 1039


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 163 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 312
           Y P    P    PP  Y P+  GY P   GAY       +P + P  +PG
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = +1

Query: 163 YEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFKPTPFPGARG 321
           Y P  + P  V PP  Y P  +G  P     N + Y + P GRP   P P  GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +1

Query: 151 QGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 306
           QG  Y+P   R     PP+   P    Y P   G  Y  +PQG+PY  P P+
Sbjct: 246 QGETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291


>02_05_0962 +
           33114226-33114684,33114806-33114853,33115166-33115286,
           33115760-33116008,33116149-33116302,33116493-33116985,
           33117524-33117596,33118285-33118343
          Length = 551

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 786 GGGGGFFXXXKXXPPPPP 733
           GGGGG F   +  PPPPP
Sbjct: 55  GGGGGGFLRLRSAPPPPP 72


>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
 Frame = +1

Query: 106 FFMIFVLALLAMAN-AQGNGYEPIDNRPYIVNPPK----DYNPNGNGYEPIDNGAYYVDR 270
           F ++   A +A A     +G  P ++  +   PP     D  P+ + Y+P  +  YY D 
Sbjct: 16  FALLLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPPPSPDYYDPPHSPDYY-DP 74

Query: 271 PQGRPYFKPTPFPGARGG 324
           P    Y+ P P P   GG
Sbjct: 75  PPSPDYYDPPPSPYYGGG 92


>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
          Length = 467

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 786 GGGGGFFXXXKXXPPPPP 733
           GGGGG F      PPPPP
Sbjct: 23  GGGGGGFSPTAAKPPPPP 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,391,096
Number of Sequences: 37544
Number of extensions: 381869
Number of successful extensions: 1096
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)