Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B08
(846 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.051
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.21
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.36
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.83
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 1.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 1.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 5.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 7.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.005
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPP 698
PPPPPPPP G PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPP 698
PPPPPPP PPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.63
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 639 PPPPPPPXPXXXGXARPPPP 698
P P PPP P G PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPP 767
Score = 29.1 bits (62), Expect = 0.83
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXAR 686
PPPPPPPP G +R
Sbjct: 775 PPPPPPPPPAVSAGGSR 791
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 457 PPPPXKKKXXPPPPPXRXGGXXXHPP 534
PP P PPPPP G PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 460 PPPXKKKXXPPPPPXRXGGXXXHPP 534
PPP PPPPP G PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 26.2 bits (55), Expect = 5.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 457 PPPPXKKKXXPPPPP 501
PPPP PPPPP
Sbjct: 765 PPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPP 698
P P P PP G PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP 766
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.051
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPP 698
PPPPPPPP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPP 698
PPPPPPP PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +3
Query: 636 PPPPPP-PPXPXXXGXARPPPP 698
P PPP PP P ++PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 636 PPPPPPPP 659
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect(2) = 0.19
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 636 PPPPPPPP 659
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 639 PPPPPPPXP 665
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 636 PPPPPPPPXP 665
PPPPPPP P
Sbjct: 238 PPPPPPPTLP 247
Score = 23.0 bits (47), Expect(2) = 0.19
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 639 PPPPPPPXP 665
P PPPPP P
Sbjct: 236 PAPPPPPPP 244
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.21
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPPL 701
P PPPPPP P A P PPL
Sbjct: 3 PAPPPPPPAP-APAAAAPAPPL 23
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPPL 701
PPPP PP P A PPPPL
Sbjct: 1715 PPPPSAPPMPAGPPSA-PPPPL 1735
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 439 QTXGXXPPPPXKKKXXPPPPPXRXGGXXXHPPXXL 543
Q PPPP PP P G PP L
Sbjct: 1701 QMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.83
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPPLS 704
PPPPPP P R PPPLS
Sbjct: 361 PPPPPPRSAP---STGRQPPPLS 380
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 8/29 (27%)
Frame = +3
Query: 636 PPPPPPP--------PXPXXXGXARPPPP 698
PPPPPPP P P A PPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +1
Query: 433 KKQTXGXXPPPPXKKKXXPPPPPXRXGGXXXHPP 534
+ G P PP + PPPPP PP
Sbjct: 344 RSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPP 698
PPPPPPPP + P P
Sbjct: 307 PPPPPPPPSNDFWKDSNEPAP 327
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 636 PPPPPPPP 659
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 639 PPPPPPPXP 665
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 636 PPPPPPPPXPXXXGXARPPPPLS 704
PPPPPPPP G P +S
Sbjct: 946 PPPPPPPPLVSAAGGKFVSPAVS 968
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 636 PPPPPPPP 659
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.2 bits (55), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 639 PPPPPPPXP 665
PPPPPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 25.8 bits (54), Expect = 7.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 636 PPPPPPPPXP 665
P PPPPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 457 PPPPXKKKXXPPPPPXRXGGXXXHPPXXL 543
P P K PPPPP R PP L
Sbjct: 734 PAPTPAVKHHPPPPPVRSSISPSMPPAPL 762
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 636 PPPPPPPP 659
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 636 PPPPPPPP 659
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPM 238
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 251
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 264
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 277
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 290
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 303
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 316
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 636 PPPP---------PPPPXPXXXGXARPPPPL 701
PPPP PPPP G PPPP+
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 329
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 594 FSPXTLFFFVXXXXPPPPPPPPXPXXXGXARPPPP 698
F T F PPPPPP P G ++ P
Sbjct: 226 FQQTTSPIFSSSSTPPPPPPRPSQPTSGESQNTNP 260
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,880,989
Number of Sequences: 5004
Number of extensions: 24809
Number of successful extensions: 317
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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