Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_B08
         (846 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    28   0.31 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.41 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 0.31
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 618 FVXXXXPPPPPPPPXPXXXGXARPPPP 698
           F      PPPPPPP P        P P
Sbjct: 776 FADGIGSPPPPPPPPPSSLSPGGVPRP 802



 Score = 28.3 bits (60), Expect = 0.31
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 636 PPPPPPPPXPXXXGXARPPPPL 701
           PPPPPPPP     G    P  L
Sbjct: 784 PPPPPPPPSSLSPGGVPRPTVL 805



 Score = 27.9 bits (59), Expect = 0.41
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 597 SPXTLFFFVXXXXPPPPPPPPXPXXXGXARPPP 695
           SP    F      PPPPPPPP         P P
Sbjct: 770 SPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRP 802


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.41
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 636 PPPPPPPPXPXXXGXARPPPPLS 704
           PPP PPPP P       PP PL+
Sbjct: 581 PPPAPPPPPP----MGPPPSPLA 599



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 8/29 (27%)
 Frame = +3

Query: 636 PPPPP--PPPXPXXXG------XARPPPP 698
           PPPPP  PPP P   G       +RPP P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 806 PXXXPPHXPPPPP 844
           P   PP  PPPPP
Sbjct: 577 PNAQPPPAPPPPP 589



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 636 PPPPPPP 656
           PPPPPPP
Sbjct: 530 PPPPPPP 536



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 638 PPPPPPP 658
           PPPPPPP
Sbjct: 530 PPPPPPP 536


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 92  SLEYRSLKRISSVKIQILK 36
           SLE +SLKR++S  I IL+
Sbjct: 413 SLELKSLKRVNSGSIVILE 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,119
Number of Sequences: 2352
Number of extensions: 8747
Number of successful extensions: 177
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)