Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_B06
         (1313 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   8.5  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 17/62 (27%), Positives = 18/62 (29%)
 Frame = +2

Query: 911  PPPXXCGXPPXXSXXXXPXRPSXVXSXXLPXPPXPPXXXXRPXGSXLPPPRXXXXPPSRX 1090
            P P   G P        P          +P  P  P     P G  LPPP     PP   
Sbjct: 64   PNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNG-PLPPPMMGMRPPPMM 122

Query: 1091 PP 1096
             P
Sbjct: 123  VP 124



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 16/59 (27%), Positives = 18/59 (30%)
 Frame = +2

Query: 917  PXXCGXPPXXSXXXXPXRPSXVXSXXLPXPPXPPXXXXRPXGSXLPPPRXXXXPPSRXP 1093
            P   G PP       P  P  +     P P   P     P G  + PP     PP   P
Sbjct: 93   PGMPGAPPLLMGPNGPLPPPMMGMR--PPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNP 149



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 18/80 (22%), Positives = 18/80 (22%)
 Frame = +1

Query: 1033 PXRLXPPAPXXXXXSPXPXSPXXXRXXLXXXPATPTXXXXXLPXPXPXXXXXPPSPXXPP 1212
            P    PP P      P    P           A P       P P P     PP    P 
Sbjct: 66   PFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPT 125

Query: 1213 XXPNPXPXSXPPXXXGXXPP 1272
                P      P      PP
Sbjct: 126  MGMPPMGLGMRPPVMSAAPP 145


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 21/64 (32%), Positives = 23/64 (35%)
 Frame = -3

Query: 1098 SGGXRXGGXXXXRGGGRXEPXGRXXXXGGXGGXGRXXXXTXEGRLGXXXXDXXGGXPHXX 919
            +GG   GG     GGG     G     GG GG GR        R      +  GG     
Sbjct: 202  AGGGGSGGGAPGGGGG---SSGGPGPGGGGGGGGRDRDHRDRDR------EREGGGNGGG 252

Query: 918  GGGG 907
            GGGG
Sbjct: 253  GGGG 256


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 8.5
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = +1

Query: 1156 LPXPXPXXXXXPPSPXXPPXXPNPXPXSXPPXXXGXXPP 1272
            LP   P     PP P  PP  P+P          G  PP
Sbjct: 576  LPNAQPPPAPPPPPPMGPP--PSPLAGGPLGGPAGSRPP 612



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 11/35 (31%), Positives = 12/35 (34%)
 Frame = +1

Query: 1192 PSPXXPPXXPNPXPXSXPPXXXGXXPPXXXTPSPP 1296
            P+   PP  P P P   PP      P      S P
Sbjct: 577  PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.141    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,655
Number of Sequences: 2352
Number of extensions: 5008
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 151645137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)