Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B05
(1061 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 6e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.010
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.029
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 34 0.029
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.039
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.16
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.27
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.63
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.84
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 6e-04
Identities = 27/95 (28%), Positives = 27/95 (28%), Gaps = 4/95 (4%)
Frame = +3
Query: 768 PPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXX 947
PP P P P P P P P PP P P P P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAP--PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 948 XPXP----XXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P PP P P PP P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/81 (29%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Frame = +3
Query: 801 PPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPP-X 977
PP P + P P P PP P P P P + P P P PPP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPP----VPIPTSTPPVPKSSSGAPSAPPPVP 1067
Query: 978 XPPXXXPXXXXXXXXPPXPXP 1040
P P PP P P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAP 1088
Score = 39.5 bits (88), Expect = 8e-04
Identities = 26/91 (28%), Positives = 26/91 (28%)
Frame = +3
Query: 768 PPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXX 947
PP P P P P P P PP P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAP---SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Query: 948 XPXPXXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P PP PP P PP P
Sbjct: 1188 VP-PVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 37.1 bits (82), Expect = 0.004
Identities = 26/89 (29%), Positives = 27/89 (30%)
Frame = +3
Query: 768 PPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXX 947
PP P P PP + P P P P PP P P P P PS P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAP--PVPKPSVGVPPVPPPSTAPPV------PTPSAGLPPVP 1230
Query: 948 XPXPXXPPPXXPPXXXPXXXXXXXXPPXP 1034
P PP P P P P
Sbjct: 1231 VPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 36.7 bits (81), Expect = 0.006
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 7/96 (7%)
Frame = +3
Query: 774 PPFXFFRXXPPXPPKKT--PXXPP--PXPXXXXPPPPXPXXXXP---XXXXXXXPXPSXP 932
PP PP P + P PP P P P P P P P PS
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 933 XPXXXXPXPXXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P PP P P PP P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 36.7 bits (81), Expect = 0.006
Identities = 26/96 (27%), Positives = 26/96 (27%), Gaps = 4/96 (4%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXX 944
PPP P P P P P PP P P P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAP---SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 945 XXPXP----XXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P PP P P PP P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 35.9 bits (79), Expect = 0.010
Identities = 26/91 (28%), Positives = 26/91 (28%)
Frame = +3
Query: 768 PPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXX 947
PP P P P P P P P PP P P P P PS P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAP--PVPKPSVAAPPVPVPSGAPP------VPKPSVAAPPVP 1153
Query: 948 XPXPXXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P P P PP P P
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 35.1 bits (77), Expect = 0.017
Identities = 27/92 (29%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +3
Query: 768 PPPPFXFFRXXP-PXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXX 944
PP P P P P P P P P PP P P P P PS P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIP--PVPKPAAGVPPVPPPSEAPP------VPKPSVGVPPV 1210
Query: 945 XXPXPXXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P P P PP P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 33.9 bits (74), Expect = 0.039
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXX 944
P PPP P PK + PP P PP P P P P P P
Sbjct: 1190 PVPPP-----SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS 1244
Query: 945 XXPXPXXPPPXXP 983
P P P
Sbjct: 1245 EAPSVSTPRSSVP 1257
Score = 32.7 bits (71), Expect = 0.090
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Frame = +3
Query: 801 PPXPPKKTPXXPPPX-PXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPX 977
PP P P P P PP P P P P P P P P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI--PTS 1048
Query: 978 XPPXXXPXXXXXXXXPPXPXP 1040
PP PP P P
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAP 1069
Score = 32.7 bits (71), Expect = 0.090
Identities = 27/91 (29%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Frame = +3
Query: 771 PPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXX 950
PP PP P P P P PP P P P PS P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTA-PPVPIPTSTPPVPKSSSG-APSAPPP---V 1066
Query: 951 PXPXXPPPXXP-PXXXPXXXXXXXXPPXPXP 1040
P P P P P P PP P P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 29.5 bits (63), Expect = 0.84
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 925 PPPPPXXXXXXPXXPPXXPPXXXXPXXXXXXXPPPXPXPP 1044
PP P P PP P P PPP PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 29.5 bits (63), Expect = 0.84
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Frame = +1
Query: 922 PPPPPPXXXXXXPXX----PPXXPPXXXXPXXXXXXXPPPXPXPPA 1047
PP PPP P PP PP P PP P P A
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Frame = +1
Query: 916 PXPPPPPPXXXXXXPXXPPXXP-PXXXXPXXXXXXXPPPXPXP 1041
P PP P P PP P P P PP P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/58 (37%), Positives = 22/58 (37%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXP 938
PPPPP P P P PPP P PPPP P P P P P P
Sbjct: 733 PPPPPAVI---VPTPAPAPIP-VPPPAPIMGGPPPPPP---PPGVAGAGPPPPPPPPP 783
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 834 PPPXPXXXXPPP-PXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPXXP 983
PPP P P P P P P P P P P P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.5 bits (78), Expect = 0.013
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 804 PXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPP 974
P PP P P P PPP P P P P P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP------PPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.051
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 916 PXPPPPPPXXXXXXPXXPPXXPP 984
P PPPPPP P PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 916 PXP-PPPPPXXXXXXPXXPPXXPPXXXXPXXXXXXXPPPXPXPPA 1047
P P P PPP P PP PP P PPP P PPA
Sbjct: 746 PAPIPVPPPAPIMGGPPPPP--PP----PGVAGAGPPPPPPPPPA 784
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Frame = +1
Query: 916 PXPPPP----PPXXXXXXPXXPPXX----PPXXXXPXXXXXXXPPPXPXPP 1044
P PPPP P P PP PP P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.84
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 922 PPPPPPXXXXXXPXXPPXXPPXXXXPXXXXXXXPPPXPXP 1041
PPPPPP PP PP P P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +1
Query: 916 PXPPPPPPXXXXXXPXXPPXXPPXXXXPXXXXXXXPPPXPXP 1041
P PPPPP P PP P P P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPP 869
PPPPP PP PP P P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.010
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 6/98 (6%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPP----KKTPXXPPPXPXXXXP--PPPXPXXXXPXXXXXXXPXPS 926
P PPP R P PP +T P P P P PP P P P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 927 XPXPXXXXPXPXXPPPXXPPXXXPXXXXXXXXPPXPXP 1040
P P P P P P PP P P
Sbjct: 449 LPPSAPIAP----PLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 31.9 bits (69), Expect = 0.16
Identities = 27/95 (28%), Positives = 28/95 (29%), Gaps = 17/95 (17%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXP-----XXXXPP----------PPXPXXXXPXX 899
PPPPP P PP+ PPP P PP PP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 900 XXXXXPXPSXPXPXXXXPXPXXP--PPXXPPXXXP 998
P P P P PP PP P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 30.3 bits (65), Expect = 0.48
Identities = 27/103 (26%), Positives = 29/103 (28%), Gaps = 4/103 (3%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXX 944
PP PP PP++ P P P PP P P P P P
Sbjct: 230 PPIPP----SIPSSRPPERVPSLSAPAP----PPIPPPSNGTVSSPPNSPPRPIAPVSMN 281
Query: 945 XXPXPXXPPPXXPP----XXXPXXXXXXXXPPXPXPXRRXXKK 1061
PP PP PP P P RR K
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK 324
Score = 29.5 bits (63), Expect = 0.84
Identities = 22/81 (27%), Positives = 23/81 (28%), Gaps = 7/81 (8%)
Frame = +3
Query: 765 PPPPPFXFFRXXPP--XPPKKTPXXPPPXP-----XXXXPPPPXPXXXXPXXXXXXXPXP 923
PPPPP R PP + PPP P P PP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 924 SXPXPXXXXPXPXXPPPXXPP 986
P PP PP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPP 393
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/82 (25%), Positives = 22/82 (26%), Gaps = 2/82 (2%)
Frame = +3
Query: 801 PPXPPKKTPXXP-PPXPXXXXPPPPXPXXXXPXXXXXXXP-XPSXPXPXXXXPXPXXPPP 974
PP PP+ P P PPP P P P S P P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 975 XXPPXXXPXXXXXXXXPPXPXP 1040
P PP P P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTP 420
Score = 27.9 bits (59), Expect = 2.6
Identities = 25/107 (23%), Positives = 27/107 (25%), Gaps = 4/107 (3%)
Frame = +2
Query: 740 PPXXXXXXPXPPPLXFFSXXPPXPPQKNTXXXXXXXXXXXXPP----PXXXXXXXXXXXX 907
PP P PPP S PP ++ P P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 908 XXPXPLXPXPXXXXPXXPXXPPXXPPXXXXPXXXXXXXPPXXPXXPP 1048
P P P P P PP PP PP P PP
Sbjct: 414 TPPVPTPPSLPPSAP--PSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 916 PXPPPPPPXXXXXXPXXPPXXPPXXXXPXXXXXXXPPPXPXPP 1044
P P PP P PP PP PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/80 (23%), Positives = 20/80 (25%)
Frame = +3
Query: 801 PPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPXX 980
PP PP + PPP P P P P P PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPP---PSRRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Query: 981 PPXXXPXXXXXXXXPPXPXP 1040
P PP P P
Sbjct: 347 AAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/70 (24%), Positives = 18/70 (25%)
Frame = +3
Query: 774 PPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXP 953
PP PP P P PP P P P P+ P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 954 XPXXPPPXXP 983
P P P
Sbjct: 475 APPPAPAPAP 484
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 922 PPPPPPXXXXXXPXXPPXXPPXXXXPXXXXXXXPPPXPXPPA 1047
PP PP P PP P P P P PPA
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP-PLPPA 472
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = +3
Query: 765 PPPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXX 944
P P P PP P P P P PP P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 945 XXPXPXXPPPXXP 983
P P P P P
Sbjct: 476 PPPAP-APAPAAP 487
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.029
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +3
Query: 768 PPPPFXFFRXXPPXPPKKTPXXPPPXPXXXXPPP---PXPXXXXPXXXXXXXPXPSXP-X 935
P PP PP P PPP P P P P P P S P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 936 PXXXXPXPXXPPPXXPP 986
P P PP PP
Sbjct: 188 PSLPSAVPPMPPKVPPP 204
Score = 32.3 bits (70), Expect = 0.12
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = +3
Query: 804 PXPPKKTPXXPPPXPXXXXP--PPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPX 977
P PP PP P PPP P P P PS P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP-PIPSSLPPPAQPAAPVKSPPS 186
Query: 978 XPPXXXPXXXXXXXXPPXP 1034
P PP P
Sbjct: 187 APSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Frame = +3
Query: 801 PPXPPKKTPXXP---PPXPXXXXPP--PPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXX 965
PP P P P PP P PP P P P PS P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP-------SAPSLPSAVPPMPPKVP 202
Query: 966 PPP 974
PPP
Sbjct: 203 PPP 205
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.3 bits (75), Expect = 0.029
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -2
Query: 931 GXEGXGXXXXXXXGXXXXGXGGGGXXXXGXGGGXXGVFLGGXGGXXRKKXKGGGGG 764
G G G G G GG G GGG G F GG G R +GG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.039
Identities = 26/73 (35%), Positives = 26/73 (35%)
Frame = -2
Query: 985 GGXXGGGXXGXGXXXXGXGXEGXGXXXXXXXGXXXXGXGGGGXXXXGXGGGXXGVFLGGX 806
GG GG G G G G G G G GG G GGG G F GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGG-GPGGFEGGPGGFGGGPGG-FGGGL 251
Query: 805 GGXXRKKXKGGGG 767
GG GGG
Sbjct: 252 GGFGGGPGGFGGG 264
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -1
Query: 1043 GGXGXGGGXXXXXXXGXXXXGGXXG-GXXGXXXXXXGGGGGGXG 915
GG G GG G GG G G G GG GGG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +3
Query: 810 PPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXP 953
PP+ + PPP P PPP P P P+ P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 801 PPXPPKKTPXXP--PPXP--XXXXPPPPXPXXXXP 893
PP PP P P PP P PPPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.63
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 765 PPPPPFXF--FRXXPPXPPKKTPXXPPPXPXXXXPPPPXP 878
PPPPP PP P PPP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.5 bits (63), Expect = 0.84
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 864 PPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPP-PXXPPXXXPXXXXXXXXPPXPXP 1040
PP P P P P P P P PP P PP P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPP---PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Query: 1041 XRR 1049
R
Sbjct: 1747 GDR 1749
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 825 PXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPXXPPXXXP 998
P PP PP P P PS P P P P PPP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP-PMPAGP-PSAPPPPLPASSAP 1741
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +3
Query: 810 PPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPXXP 983
PP + PP PPPP P P P P+ P P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPP-PMSVPP--PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +3
Query: 804 PXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXP 923
P PP + PP P PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.27
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 922 PPPPPPXXXXXXPXXPPXXPP 984
PPPPPP P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 922 PPPPPPXXXXXXPXXPPXXPP 984
PPPPPP PP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Frame = +3
Query: 810 PPKKTPXXPPPX---PXXXXPPPPXP 878
PP P PPP P PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 967 PPXXPPXXXXPXXXXXXXPPPXPXPPAXXXK 1059
PP PP P PP P PP K
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 916 PXPPPPPPXXXXXXPXXPPXXPP 984
P PPPPP P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 555 PPPPPPXGXXXKKXXXSP 502
PPPPPP G K+ +P
Sbjct: 24 PPPPPPPGYVKKRKNKTP 41
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.63
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -2
Query: 892 GXXXXGXGGGGXXXXGXGGGXXGVFLGGXGGXXRKKXKGGGGG 764
G G GG G GGG G GG GG + +GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG--ARGGRGGRGG 52
Score = 27.9 bits (59), Expect = 2.6
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -2
Query: 931 GXEGXGXXXXXXXGXXXXGXGG-GGXXXXGXGGGXXGVFLGGXGGXXRKKXKGGGGG 764
G G G G GG GG GGG G GG GG R +GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGA-RGGRGG--RGGARGGRGG 59
Score = 26.2 bits (55), Expect = 7.8
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = -2
Query: 982 GXXGGGXXGXGXXXXGXGXEGXGXXXXXXXGXXXXGXGGGGXXXXGXGGGXXGVFLGGXG 803
G GG G G G G G G G GGG G G G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRG----------GARGGGRGGARGGRGGRGGARGGRG 58
Query: 802 GXXRKKXKGGGG 767
G + GG
Sbjct: 59 GSSGGRGGAKGG 70
Score = 26.2 bits (55), Expect = 7.8
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -2
Query: 892 GXXXXGXGGGGXXXXGXGGGXXGVFLGGXGG--XXRKKXKGGGGG 764
G G G GG G GG G GG GG R GG GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGG--RGGRGGARGGRGGSSGGRGG 66
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.84
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 801 PPXPPKKTPXXPPPXPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPPXX 980
P PP TP P P PPP P P PS PPP
Sbjct: 221 PEIPPTYTPKQADPLPAPP--PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPAT 278
Query: 981 P 983
P
Sbjct: 279 P 279
Score = 23.4 bits (48), Expect(2) = 4.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 916 PXPPPPPP 939
P PPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 23.4 bits (48), Expect(2) = 6.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 916 PXPPPPPP 939
P PPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 21.8 bits (44), Expect(2) = 4.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 1021 PPPXPXPPA 1047
PPP P PPA
Sbjct: 190 PPPPPPPPA 198
Score = 21.0 bits (42), Expect(2) = 6.9
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = +1
Query: 958 PXXPPXXPPXXXXPXXXXXXXPPPXPXP 1041
P PP P P PPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.9
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 2/64 (3%)
Frame = +3
Query: 801 PPXPPKKTPXXPPP--XPXXXXPPPPXPXXXXPXXXXXXXPXPSXPXPXXXXPXPXXPPP 974
PP PP P PP P PP P P P P P P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAP-VPLTGKETAVPLSSMP 1941
Query: 975 XXPP 986
PP
Sbjct: 1942 NAPP 1945
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,993,688
Number of Sequences: 5004
Number of extensions: 32210
Number of successful extensions: 531
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 559212080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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