Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B02
(1040 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.017
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.37
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.64
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 5.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 5.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 5.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 5.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 5.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 5.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 5.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 5.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 5.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 5.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 5.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 5.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 5.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 5.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 5.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 5.9
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect(2) = 0.017
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 849 PPPPXPPPPP 878
PP P PPPPP
Sbjct: 338 PPKPAPPPPP 347
Score = 23.8 bits (49), Expect(2) = 0.017
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 990 PPPPPPPPXPXXXXP 1034
P P PPPP P P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 840 PXXPPPPXPPPPPXXP 887
P P PP PPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 988 PPPPPPXPPXPXXXXP 1035
PP P P PP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.6 bits (46), Expect = 5.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 880 PPXXXPPPPP 909
PP PPPPP
Sbjct: 338 PPKPAPPPPP 347
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.6 bits (56), Expect = 0.37
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 990 PPPPPPPP 1013
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 849 PPPPXPPP 872
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 852 PPPXPPPP 875
PPP PPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 855 PPXPPPPP 878
PP PPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 991 PPPPPXPP 1014
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 996 PPPPPPXP 1019
PPPPPP P
Sbjct: 1355 PPPPPPPP 1362
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.8 bits (54), Expect = 0.64
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 848 PPXPXPXPPPXXPXXXPP 901
PP P PPP P PP
Sbjct: 39 PPNPSQGPPPGGPPGAPP 56
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 3.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 990 PPPPPPPP 1013
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNP 146
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 375 PFPPRFIPPDMYRLRPPPNP 394
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 360 PFPPRFIPPDMYRLRPPPNP 379
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 850 PXPPXXPPPXPPXXXPPPPP 909
P PP PP PPP P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNP 395
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,075
Number of Sequences: 438
Number of extensions: 11564
Number of successful extensions: 70
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 34583787
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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