Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_B01
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.24
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.56
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.99
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.99
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.99
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 29 4.0
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 5.3
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 29 5.3
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 28 7.0
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 28 9.2
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 28 9.2
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 421 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 597
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 598 VSREEMEFT 624
V ++ T
Sbjct: 369 VEDDDSSST 377
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 98 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 187
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 541 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 437
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 478 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 609
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 499 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 609
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 478 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 609
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 499 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 609
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 478 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 609
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 499 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 609
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 638 TLLSVVNSISSRLTF---VEVVSVGSATGLLLSSGCFCFSGKVI 516
T+ +V+N + + + V+SV TGL+L G FC +G I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 529 LKQKQPEDSKRPVAEPTETTSTNVSRE 609
LK+K+P S +PV++P+ T V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 487 SWVY--EKD-VLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEMEFTTXSNVRDV 648
SW Y +KD + F +++ E+ K+PV + + N E+E T +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 427 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVS 603
S F Y K+++ D + ++ Y+K T P+ QK + S A T ST S
Sbjct: 5 SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSS 63
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -2
Query: 623 VNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFCI 450
V + RLTF EV ++T LL+ C FN + +PS F++ RF +
Sbjct: 240 VKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPLRFIL 297
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -2
Query: 623 VNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFCI 450
V + RLTF EV ++T LL+ C FN + +PS F++ RF +
Sbjct: 232 VKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPLRFIL 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,059,698
Number of Sequences: 27780
Number of extensions: 315525
Number of successful extensions: 884
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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