Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_A22
(1031 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 36 8e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 31 0.022
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 31 0.022
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 3.4
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 35.5 bits (78), Expect = 8e-04
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +3
Query: 459 GSQGPDARCLSDGTPGESCRXYRERHRAXYICIRLRNEFRASXSREIHLQVNAPVSTRIL 638
GS G A+ ++D RH Y+C AS S L VN P +
Sbjct: 627 GSSGVLAKKVADRVSMLMISVITARHAGEYVCTAENAAGTASHSTT--LTVNVPPRWILE 684
Query: 639 SAPRTLTAGAEMSLPCEVDGYPQPE 713
+ G++ + C+ DG+P+P+
Sbjct: 685 PTDKAFAQGSDARVECKADGFPKPQ 709
Score = 27.9 bits (59), Expect = 0.16
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 516 RXYRERHRAXYICIRLRNEFRASXSREIHLQVNAPVSTRILSAPRTLTAGAEMSLPCEVD 695
R R Y+CI N S E L V AP+ I + +T+ G + C V
Sbjct: 275 REARVEDSGKYLCIV--NNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTCNVR 332
Query: 696 GYP 704
G P
Sbjct: 333 GNP 335
Score = 27.9 bits (59), Expect = 0.16
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +3
Query: 525 RERHRAXYICIRLRNEFRASXSREIHLQVN-APVSTRILSAPRTLTAGAEMSLPCEVDGY 701
++ + Y C ++ A + E+ L P R A TL G M L C G
Sbjct: 361 KKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGN 420
Query: 702 PQPE 713
P PE
Sbjct: 421 PTPE 424
Score = 22.2 bits (45), Expect = 7.8
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +3
Query: 609 VNAPVSTRILSAPRTLTAGAEMSLPCEVDGYPQPE 713
V P T T ++ LPC G P PE
Sbjct: 1273 VRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPE 1307
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 30.7 bits (66), Expect = 0.022
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 537 RAXYICIRLRNEF-RASXSREIHLQVNAPVSTRILSAPRTLTAGAEMSLPCEVDGYPQPE 713
R Y CI R+E A S E+ L NAP +TL G +SL C G P P+
Sbjct: 394 RGMYQCIVRRSEGDTAQASAELQLG-NAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQ 452
Score = 26.2 bits (55), Expect = 0.48
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 588 SREIHLQVNAPVSTRILSAPRTLTAGAEMSLPCEVDGYPQ 707
S EI L V AP+ + ++ G CEV +PQ
Sbjct: 320 SAEIRLIVTAPLHVEVTPPLLSVHLGGNAEFRCEVSTHPQ 359
Score = 23.0 bits (47), Expect = 4.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 651 TLTAGAEMSLPCEVDGYPQPE 713
T AG + L C V GYP E
Sbjct: 529 TAVAGETLRLKCPVAGYPIEE 549
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 30.7 bits (66), Expect = 0.022
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 537 RAXYICIRLRNEF-RASXSREIHLQVNAPVSTRILSAPRTLTAGAEMSLPCEVDGYPQPE 713
R Y CI R+E A S E+ L NAP +TL G +SL C G P P+
Sbjct: 394 RGMYQCIVRRSEGDTAQASAELQLG-NAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQ 452
Score = 26.2 bits (55), Expect = 0.48
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 588 SREIHLQVNAPVSTRILSAPRTLTAGAEMSLPCEVDGYPQ 707
S EI L V AP+ + ++ G CEV +PQ
Sbjct: 320 SAEIRLIVTAPLHVEVTPPLLSVHLGGNAEFRCEVSTHPQ 359
Score = 23.0 bits (47), Expect = 4.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 651 TLTAGAEMSLPCEVDGYPQPE 713
T AG + L C V GYP E
Sbjct: 529 TAVAGETLRLKCPVAGYPIEE 549
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 3.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 570 RFSGECRCRXPGVVPGTXDTILQACRPTSNARPALGCRXIVIFSFPSK 427
RF EC R G +PG T PT G R +V+ S +K
Sbjct: 59 RFRYECEGRSAGSIPGVNSTSENKTFPTIKIVGYKG-RALVVVSCVTK 105
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.4 bits (48), Expect = 3.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 570 RFSGECRCRXPGVVPGTXDTILQACRPTSNARPALGCRXIVIFSFPSK 427
RF EC R G +PG T PT G R +V+ S +K
Sbjct: 59 RFRYECEGRSAGSIPGVNSTSENKTFPTIKIVGYKG-RALVVVSCVTK 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,406
Number of Sequences: 438
Number of extensions: 5980
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 34467615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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