Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_A21
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55258-1|AAC50765.1| 1299|Homo sapiens hBRAVO/Nr-CAM precursor p...    31   7.2  
BX538010-1|CAD97960.1| 1183|Homo sapiens hypothetical protein pr...    31   7.2  
BC115736-1|AAI15737.1| 1192|Homo sapiens NRCAM protein protein.        31   7.2  
BC114570-1|AAI14571.1| 1180|Homo sapiens NRCAM protein protein.        31   7.2  
AF172277-2|AAF22283.1| 1236|Homo sapiens NgCAM-related related c...    31   7.2  
AF172277-1|AAF22282.1| 1308|Homo sapiens NgCAM-related related c...    31   7.2  
AB002341-1|BAA20801.2| 1187|Homo sapiens KIAA0343 protein.             31   7.2  
AJ001057-1|CAA04507.1| 1299|Homo sapiens NrCAM protein protein.        30   9.5  

>U55258-1|AAC50765.1| 1299|Homo sapiens hBRAVO/Nr-CAM precursor
            protein.
          Length = 1299

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 934  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 971


>BX538010-1|CAD97960.1| 1183|Homo sapiens hypothetical protein
            protein.
          Length = 1183

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 923  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 960


>BC115736-1|AAI15737.1| 1192|Homo sapiens NRCAM protein protein.
          Length = 1192

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 920  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 957


>BC114570-1|AAI14571.1| 1180|Homo sapiens NRCAM protein protein.
          Length = 1180

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 920  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 957


>AF172277-2|AAF22283.1| 1236|Homo sapiens NgCAM-related related cell
            adhesion molecule /alternative carboxyl terminus protein.
          Length = 1236

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 939  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 976


>AF172277-1|AAF22282.1| 1308|Homo sapiens NgCAM-related related cell
            adhesion molecule protein.
          Length = 1308

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 939  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 976


>AB002341-1|BAA20801.2| 1187|Homo sapiens KIAA0343 protein.
          Length = 1187

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 927  ASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPS 964


>AJ001057-1|CAA04507.1| 1299|Homo sapiens NrCAM protein protein.
          Length = 1299

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 664  AKPDRTIKIPGVSPWKPPSCXLLFPTLXAYRIXWSPLS 777
            A PDR    P   P  P S  ++ PTL +  + W P S
Sbjct: 934  ASPDRVFNTPEGVPSVPSSLKIVNPTLDSLTLEWDPPS 971


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,941,874
Number of Sequences: 237096
Number of extensions: 1164573
Number of successful extensions: 1325
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)