Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_A14
         (951 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   1.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 450 KXXPPPPPPXKKXP 491
           K  PPPPPP    P
Sbjct: 340 KPAPPPPPPSSSGP 353



 Score = 22.2 bits (45), Expect = 7.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 853 KXXPPPPPP 879
           K  PPPPPP
Sbjct: 340 KPAPPPPPP 348


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 841  AXXHKXXPPPPPPP 882
            A   +  PPPPPPP
Sbjct: 1349 AWRQQQPPPPPPPP 1362


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
 Frame = +3

Query: 300 PPTXXXGXPPGGXP--PP 347
           PP    G PPGG P  PP
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = -2

Query: 950 GXXXXXGXXGGGXGGVXXXXGXXGGGGGG 864
           G     G   G  GG        GGGGGG
Sbjct: 23  GSSSAGGVVTGASGGSIVVGANNGGGGGG 51


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 62  VVHSREFXQTLKGSXYYWARLGPGGGSAPQG 154
           +VH   F QT K   Y W +L    G+   G
Sbjct: 225 IVHWTPFFQTYKKQRYPWVQLAGHQGNFRAG 255


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 62  VVHSREFXQTLKGSXYYWARLGPGGGSAPQG 154
           +VH   F QT K   Y W +L    G+   G
Sbjct: 140 IVHWTPFFQTYKKQRYPWVQLAGHQGNFRAG 170


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 62  VVHSREFXQTLKGSXYYWARLGPGGGSAPQG 154
           +VH   F QT K   Y W +L    G+   G
Sbjct: 459 IVHWTPFFQTYKKQRYPWVQLAGHQGNFRAG 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,926
Number of Sequences: 438
Number of extensions: 7854
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)