Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_A10
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 313 2e-86
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 172 5e-44
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 170 2e-43
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 128 1e-30
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 81 2e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 81 3e-16
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 77 4e-15
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 55 2e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 35 0.017
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 30 0.49
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.86
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 4.6
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 6.0
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 6.0
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 8.0
SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces... 26 8.0
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 8.0
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 8.0
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 313 bits (769), Expect = 2e-86
Identities = 150/181 (82%), Positives = 158/181 (87%)
Frame = +3
Query: 297 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 476
P G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97
Query: 477 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGD 656
PEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYA GRTTGIVLDSGD
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157
Query: 657 GVSHTVPIYEGYALPHAILASGLNPVATSQNYLMKILTEXG*SFTTTAEREIVRDIKXXL 836
GV+HTVPIYEGYALPHAI+ L +YLMKIL E G +F+TTAEREIVRDIK L
Sbjct: 158 GVTHTVPIYEGYALPHAIMRLDL-AGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKL 216
Query: 837 C 839
C
Sbjct: 217 C 217
Score = 69.3 bits (162), Expect = 7e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +1
Query: 187 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 294
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 172 bits (419), Expect = 5e-44
Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Frame = +3
Query: 312 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 488
VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + ++ L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 489 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSH 668
P+LLTE PL N+EK+ + +ET N PA+ ++Q VL+LYA RTTGIVL+ GDG++H
Sbjct: 107 PLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTH 166
Query: 669 TVPIYEGYALPHAILASGLNPVATSQNYLMKILTEXG*SFTTTAEREIVRDIKXXLCLXR 848
+VPIY+G+++P AI + + +YL L + G ++AE+EIVR+IK C
Sbjct: 167 SVPIYDGFSIPSAIQQEEIGGRDVT-DYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVA 225
Query: 849 S 851
S
Sbjct: 226 S 226
Score = 44.0 bits (99), Expect = 3e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 205 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 294
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 170 bits (414), Expect = 2e-43
Identities = 81/171 (47%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Frame = +3
Query: 333 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 512
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 513 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGY 692
+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE
Sbjct: 110 MNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESV 169
Query: 693 ALPHAILASGLNPVA--TSQNYLMKILTEXG*SFTTTAEREIVRDIKXXLC 839
L H + G VA + YL+ +L G +F TA+ E VR++K LC
Sbjct: 170 VLNHLV---GRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLC 217
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 193 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 294
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 128 bits (309), Expect = 1e-30
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 9/134 (6%)
Frame = +3
Query: 336 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 512
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 513 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRT--------TGIVLDSGDGVSH 668
LNP NRE +IMFE+FN +Y+A+QAVL+L A + TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192
Query: 669 TVPIYEGYALPHAI 710
+P+ EGY + +I
Sbjct: 193 IIPVAEGYVIGSSI 206
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 205 LVVDNGSGMCKAGFAGDDAPRAVFPS 282
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 81.4 bits (192), Expect = 2e-16
Identities = 39/107 (36%), Positives = 58/107 (54%)
Frame = +3
Query: 378 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 557
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 558 ETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEGYAL 698
E+ PA Y+A Q + +A G+ T ++D G S IY+G+ L
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 190 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 294
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 80.6 bits (190), Expect = 3e-16
Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Frame = +3
Query: 324 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 500
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 501 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGR--TTGIVLDSGDGVSHTV 674
TE NP R MT+++FE +N P++ I + S Y + ++GIVL+ G+ SH +
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVI 180
Query: 675 PIYEG 689
P+ G
Sbjct: 181 PVLNG 185
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 205 LVVDNGSGMCKAGFAGDDAPRAVF 276
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 76.6 bits (180), Expect = 4e-15
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Frame = +3
Query: 297 PAIRGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 470
P+ GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 471 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDS 650
V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A ++T +++D
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDI 156
Query: 651 GDGVSHTVPIYEGYALPHAILASGL 725
G + P+ +G + I L
Sbjct: 157 GSDNASVTPVVDGLIIRKGIFKQSL 181
Score = 35.9 bits (79), Expect = 0.007
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 190 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRG 291
EE+ +LV+D GS + G+AG+++P + PS G
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 54.8 bits (126), Expect = 2e-08
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 393 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 560
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 561 TFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYEG 689
P +A + ++ LYA G G+V+D G + PI +G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 34.7 bits (76), Expect = 0.017
Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 18/184 (9%)
Frame = +3
Query: 342 YVGDEAQSKRGILTLKYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEA 509
++G+E + TL++ H G + +W +W N + P ++ +LLT+
Sbjct: 43 FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQP 102
Query: 510 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAXGRTTG--------------IVLD 647
+ Q++FE F A A L + G T +V+D
Sbjct: 103 VFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVID 162
Query: 648 SGDGVSHTVPIYEGYALPHAILASGLNPVATSQNYLMKILTEXG*SFTTTAEREIVRDIK 827
SG +H +P+ + A+ + + NYL ++++ + E IV +IK
Sbjct: 163 SGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLT-NYLKEVISYR--KYNMMEETYIVNEIK 219
Query: 828 XXLC 839
+C
Sbjct: 220 ESVC 223
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 453 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 596
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.9 bits (64), Expect = 0.49
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 598 PCSRCTRXVVPPVSCWTPATVSPTPCPSTKDTHSP 702
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.86
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 577 PCTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 711
P T+P P T V P S P+ P P PS++ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 553 CSKHSTRPPCTSPSKPCSRCTRXVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 711
C+ ++ PP T S S VPP S T + PT ST SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 495 LLTEAPLNPKANREKMTQIMFETFN 569
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 373 PLLLCASSPT*E--SFCPIPTITPLMAGPSHDSR 278
P SSPT SF P P +TPL+ P+H R
Sbjct: 394 PCSTAPSSPTFSTRSFSPTPDVTPLVT-PAHSPR 426
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 232 TYRSHCLLPTRQLLRRTS*ISEI 164
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 578 HVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPGVWT 724
+VR HP A+ +R H Y +G C+ ++ R+ P+ + T
Sbjct: 248 YVRLHPGEAVFLRALDPHAYVSGNIIECMAASDNVIRLGFTPKFKDIET 296
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 389 FEGQDTSFALCLISYIRVLLSHTDHHA 309
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 580 CTSPSKPCSRCTRXVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 711
C +PS+ C + PV + T S TP P+T + +PTP+
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPT 865
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,539,996
Number of Sequences: 5004
Number of extensions: 77181
Number of successful extensions: 241
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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