Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP13_F_A10
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.6  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   6.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   6.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.4  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   8.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   8.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 465  LRVAPEEHPVLLTEAPLNPKANREKM 542
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +3

Query: 279 LESWEGPAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 428
           L  WE  A  G     G+K      E   KRG++  +  ++    T +DD
Sbjct: 175 LGEWEKRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +3

Query: 279 LESWEGPAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 428
           L  WE  A  G     G+K      E   KRG++  +  ++    T +DD
Sbjct: 175 LGEWEKRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 608 AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHP 712
           ++  +++HR        C P   +L +I + P HP
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHP 96


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 668 VGDTVAGVQHDTGGTTXRVQREHGLDGDVHG 576
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = -1

Query: 755 EVVL*GRDRVKSRRQDGVGECVSFVDGHGVGDTVAG 648
           EV+  G + +  R  +G+G  + F   + + +   G
Sbjct: 244 EVIDYGNEAISKREYNGIGAVIEFKYSYEISNAFRG 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,768
Number of Sequences: 438
Number of extensions: 5600
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)