Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP13_F_A07
(935 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 7e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.011
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.019
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 0.71
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.94
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.94
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 4.6
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 26 8.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 7e-04
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 485 PPPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXG-GGXXPXXPPP 619
PPP P P PPP P P PP P G G P PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 530 PXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXPP 652
P P P P P PP P GG P PPP G PP
Sbjct: 742 PTPAPAPI---PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -1
Query: 752 PPPPXXGAXXXAPXXAPPXAXKXXXXXXGPPPXXGXEXXXXPPRXGGGXXXXXPPPXXXX 573
PPPP P AP GPPP PP G PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP------PPPPPGVAGAGPPPPPPPPPAV 785
Query: 572 GGGG 561
GG
Sbjct: 786 SAGG 789
Score = 32.3 bits (70), Expect = 0.10
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = +2
Query: 536 PPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXPPGXGG----XPXXXXXXXGPXG 703
PPPPP P P P P P GG PPG G P G
Sbjct: 733 PPPPPAVIVPTPAPAPI---PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 704 ARXXGPXP 727
+R P P
Sbjct: 790 SRYYAPAP 797
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 529 PPXPPXPXXXXPPPPXXXXGGGXXXXXPPP 618
PP P PPPP G G PPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.94
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 754 PPPPXXRXRGXGPPXXRPPGP 692
PPPP G GPP PP P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect(2) = 0.057
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -2
Query: 754 PPPPXXRXRGXGPPXXRPPGPXXXXXXXXXPPXPXGXXXXXPPP 623
PPPP P P P PP P G PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 404 GGGXXXXPPPRXGGPXKPXXPPPXP 330
GG PPP G P PPP P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Frame = +1
Query: 472 PXXXPPPXXGGGGXSAXXGPPXPPXPXXXXPPPPXX-XXGGGXXXXXPPP 618
P PPP GG PP PPPP GG P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 788 PXGGGXPXXXPXPPPPXXGAXXXAPXXAPPXAXKXXXXXXGPPP 657
P GG P P PPP GA P PP P P
Sbjct: 756 PIMGGPPP--PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 470 GQXXXPPPXXGGGGXXPXXXPXPPP 544
G PPP G G P P PPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -2
Query: 754 PPPPXXRXRGXGPPXXRPPGPXXXXXXXXXPPXP 653
P PP G PP PPG PP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -1
Query: 509 PPPPXXGGGXXXGXXXXXPPGPPXXGGXXKKNXPXGGGXXXXPPP 375
PPPP PP P GG P G PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +1
Query: 400 PPXGXFFXFXPPXXGGPGGXXFXXPXXXPPPXXGGGGXSAXXGPPXPPXP 549
PP PP PG P PPP G S P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 23.0 bits (47), Expect(2) = 0.057
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 547 GXGGXGXPXXXXPPPPXXXGG 485
G G G P PPP GG
Sbjct: 769 GVAGAGPPPPPPPPPAVSAGG 789
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 35/152 (23%), Positives = 35/152 (23%), Gaps = 8/152 (5%)
Frame = +2
Query: 503 GGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXPPGXGGXPXXXX 682
G G P PPPPP P G P PPP PP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS-SRAVS 386
Query: 683 XXXGPXGARXXGPXPXXPXXGGGGXGXXRGRPPPXXXP------XXXXXPXPXXXGGXXX 844
P A P P G P P P P G
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 845 PPXXXXXGXGXXXPGG--XXPPXAXPXXXPPP 934
PP P G PP PPP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 33.9 bits (74), Expect = 0.033
Identities = 38/178 (21%), Positives = 38/178 (21%), Gaps = 9/178 (5%)
Frame = -1
Query: 836 PPPXGGXXXXXXXXXXPXGGGXPXXXPXPPPPXXGAXXXAPXXAPPXAXKXXXXXXGPPP 657
PPP G P PPPP A P PP PPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL--PPQGRSAPPP---PPP 366
Query: 656 XXGXEXXXXPPRXGGGXXXXXPP--PXXXXGGGGXXXXGXGGXGGPXXAEXPPPPXXGGG 483
PP PP P G G P PP
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPS 426
Query: 482 XXXGXXXXXPPGPPXXGGXXKKNXPXG-------GGXXXXPPPRXGGPXKPXXPPPXP 330
PP P P G PP P P P P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 33.5 bits (73), Expect = 0.044
Identities = 32/151 (21%), Positives = 33/151 (21%), Gaps = 3/151 (1%)
Frame = -3
Query: 771 PRXXPXPPPPXX---GXXGXGPXXRAPXGPQXXXXXXGXPPXPGGXXXXXPPPXGGGXXG 601
P P PPP P AP PP P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 600 XXPPPXGXXGGXGXXXXGGGGGXGXXXGXXPPPPXXGGGXXXWPXKXXXPXPPXPRGXKX 421
PPP G G G PPP G P + PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP----- 365
Query: 420 KKXPXGXXXXXFXPPAPGGXRETQXPPPXXP 328
P PP R PP P
Sbjct: 366 ---PRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 28.7 bits (61), Expect = 1.2
Identities = 28/139 (20%), Positives = 29/139 (20%)
Frame = -1
Query: 752 PPPPXXGAXXXAPXXAPPXAXKXXXXXXGPPPXXGXEXXXXPPRXGGGXXXXXPPPXXXX 573
PP AP PP + PP P PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVS 300
Query: 572 GGGGXXXXGXGGXGGPXXAEXPPPPXXGGGXXXGXXXXXPPGPPXXGGXXKKNXPXGGGX 393
P P G G PP PP P G
Sbjct: 301 AAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP-PPRSNAAGSIPLPPQGRS 359
Query: 392 XXXPPPRXGGPXKPXXPPP 336
PPP P PPP
Sbjct: 360 APPPPPPRSAPSTGRQPPP 378
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 530 PXPPPPPXXXXPXPPXXPXGGGXXPXXPPP 619
P PPPPP P G PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 8/52 (15%)
Frame = -2
Query: 754 PPPPXXRXRGXGP--------PXXRPPGPXXXXXXXXXPPXPXGXXXXXPPP 623
PPPP R RG P PP P P P G PPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 25.8 bits (54), Expect = 8.8
Identities = 22/94 (23%), Positives = 23/94 (24%), Gaps = 6/94 (6%)
Frame = +1
Query: 397 PPPXGXFFXFXPPXXGGPGGXXFXXPXXXPPPXXGGGGXSAXXGPPXPPXPX------XX 558
PPP PP G P P G G PP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 559 XPPPPXXXXGGGXXXXXPPPXRGGXXXXSXPXXG 660
PPP PPP G + P G
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -3
Query: 663 PPXPGGXXXXXPPPXGGGXXGXXPPPXGXXGGXGXXXXGGGGGXG 529
PP P G P GGG G P G GG G GG GG G
Sbjct: 99 PPPPRGPLFG--PRIGGGHHGPLHGPHGGFGGRGGGRMGGRGGRG 141
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = +2
Query: 485 PPPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXP-PG 655
PP P PPPPP P P P G PPP P PG
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 451 GGXXFXXPXXXPPPXXGGGGXSAXXGPPXPPXPXXXXPPPPXXXXGGGXXXXXPPP 618
GG P PP P PP P PPP G PPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +1
Query: 487 PPXXGGGGXSAXXGPPXPPXPXXXXPPPPXXXXGGGXXXXXPPPXRGGXXXXSXPXXG 660
PP P PP P PPPP PPP S P G
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.1 bits (62), Expect = 0.94
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Frame = -2
Query: 781 GGAXPXXXXPPPPXXRXRGXGPPXXR----PPGPXXXXXXXXXPPXPXGXXXXXPPP 623
GG P PP R + PP PP P PP P G PPP
Sbjct: 1679 GGMAPAHPVSTPPV-RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Frame = -3
Query: 669 GXPPXPGGXXXXX----PPPXGGGXXGXXPPPXGXXGGXGXXXXGGGGGXGXXXGXXPPP 502
G PP PGG GG G P G GG G G GG G G P
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Query: 501 PXXGGG 484
GGG
Sbjct: 259 GGFGGG 264
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 618 GGGXXGXXPPPXGXXGGXGXXXXGGGGGXGXXXGXXPPPPXXGG 487
GGG G P G GG G G GG G G P GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Frame = -3
Query: 618 GGGXXGXXPPP-----XGXXGGXGXXXXGGGGGXGXXXGXXPPPPXXGGG 484
GGG G P P G GG G G GG G G P GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 27.9 bits (59), Expect = 2.2
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Frame = -1
Query: 617 GGGXXXXXPPP-----XXXXGGGGXXXXGXGG-XGGPXXAEXPPPPXXGG-GXXXGXXXX 459
GGG P P GG G G GG GGP E P GG G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 458 XPPGPPXXGG 429
GP GG
Sbjct: 254 FGGGPGGFGG 263
Score = 26.2 bits (55), Expect = 6.6
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = -3
Query: 780 GGRPRXXPXPPPPXXGXXGXGPXXRAPXGPQXXXXXXGXPPXPGGXXXXXPPPXGGGXXG 601
GG P P G G G G G G P GGG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 600 XXPPPXGXXGGXGXXXXGGGGGXG 529
P G GG GG GG G
Sbjct: 254 FGGGPGGFGGG-----PGGHGGPG 272
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +3
Query: 609 PPPPPGGGXXXFXPXGXGGXXXXXXXLXGPGGRXXGGPXPRXRXXG--GGGXXXXGXAP 779
PPP PGG G G G G GGP G GGG G P
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Frame = +3
Query: 609 PPPP-----PGGGXXXFXPXGXGGXXXXXXXLXGPGG 704
PPPP PG G F G GG + GPGG
Sbjct: 76 PPPPGAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGG 112
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.94
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 485 PPPXXGGGGXXPXXXPXPPPPP 550
PPP G P P PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 518 PXXXPXPPPPPXXXXPXPPXXPXGGG 595
P P PPPPP P P P G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Frame = +2
Query: 518 PXXXPXPPPPPXXXXP---XPPXXPXG 589
P P PPPPP P PP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.94
Identities = 32/155 (20%), Positives = 32/155 (20%)
Frame = +2
Query: 470 GQXXXPPPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXP 649
G PPP P PP P P P P P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP--SVAVPPVP 1115
Query: 650 PGXGGXPXXXXXXXGPXGARXXGPXPXXPXXGGGGXGXXRGRPPPXXXPXXXXXPXPXXX 829
G P P G P PP P P P
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Query: 830 GGXXXPPXXXXXGXGXXXPGGXXPPXAXPXXXPPP 934
G P G P PP P PP
Sbjct: 1176 SG-IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 29.1 bits (62), Expect = 0.94
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = -3
Query: 759 PXPPPPXXGXXGXGPXXRAPXGPQXXXXXXGXPPXPGGXXXXXPPPXGGGXXGXXPPPXG 580
P PPP P AP G G PP P P P P P G
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Score = 27.9 bits (59), Expect = 2.2
Identities = 31/151 (20%), Positives = 32/151 (21%), Gaps = 1/151 (0%)
Frame = +2
Query: 485 PPPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXPPGXGG 664
PP P P PP PP G PP P G
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 665 XPXXXXXXXGPXGARXXGPXPXXPXXGGGGXGXXR-GRPPPXXXPXXXXXPXPXXXGGXX 841
P P + P P PP P P P G
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 842 XPPXXXXXGXGXXXPGGXXPPXAXPXXXPPP 934
P P G PP P PP
Sbjct: 1142 V-PKPSVAAPPVPAPSG-APPVPKPSVAAPP 1170
Score = 27.9 bits (59), Expect = 2.2
Identities = 28/148 (18%), Positives = 30/148 (20%)
Frame = +2
Query: 488 PPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXPPGXGGX 667
PP G P P PP P P P P P G P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP--SGAPPVPKPSVAAP 1169
Query: 668 PXXXXXXXGPXGARXXGPXPXXPXXGGGGXGXXRGRPPPXXXPXXXXXPXPXXXGGXXXP 847
P P + P P P P P P G
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 848 PXXXXXGXGXXXPGGXXPPXAXPXXXPP 931
P P P + P P
Sbjct: 1230 PVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +2
Query: 485 PPPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPP 619
PP G P P PP P P P PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 485 PPPXXGGGGXXPXXXPXPPPPPXXXXPXPPXXPXGGGXXPXXPPPXGGGXXXXXPPGXGG 664
PP G P P P PP P G P P P G PG G
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPG 553
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.0 bits (47), Expect(2) = 4.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 488 PPXXGGGGXXPXXXPXPPPPP 550
PP P P PPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 530 PXPPPPPXXXXP 565
P PPPPP P
Sbjct: 236 PAPPPPPPPTLP 247
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 754 PPPPXXRXRGXGPPXXRP 701
PPPP RG PP RP
Sbjct: 129 PPPPAGFGRGAPPPGFRP 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,196,896
Number of Sequences: 5004
Number of extensions: 44043
Number of successful extensions: 338
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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