Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P24
(930 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.057
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.18
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.18
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.40
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 22 5.7
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 26 6.6
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.014
Identities = 22/66 (33%), Positives = 23/66 (34%)
Frame = -3
Query: 925 GXGGGXGGXXGGGGXXRGVGXWVXGGXXXAGRXAXGGGEXXXEXXXXXXXXXXGXXXGGW 746
G GGG GG G G G G + G G GGG E G GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 745 GGXXRG 728
GG G
Sbjct: 252 GGFGGG 257
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.057
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 816 PPXAXRPAXFXPPXTHXPTPRXXPPPPXXPPXPPPXP 926
PP P PP P P PP P PP PP P
Sbjct: 1699 PPQMSAPTP-PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 810 SPPPXAXRPAXFXPPXTHXPTPRXXPPPPXXPPXPPPXP 926
S PP RP PP PTP P PP PP P
Sbjct: 1688 STPPV--RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +1
Query: 679 PXPPPPXXXXSXXTXAPPXPXLP--TPPXP 762
P PPPP APP P P PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +3
Query: 741 PPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPXTHXPTPRXXP--PPPXXPPXP 914
P HP +PPP P PP + P P P PPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPP---PMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 915 PP 920
P
Sbjct: 1740 AP 1741
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 813 PPPXAXRPAXFXPPXTHXPTPRXXPPPPXXPPXPPPXP 926
PPP + P PP P PPPP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPP--SAPPPPLPASSAPSVP 1744
Score = 23.0 bits (47), Expect(2) = 2.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 679 PXPPPPXXXXSXXTXAPPXPXLPTPPXP 762
P PP S APP PTPP P
Sbjct: 1686 PVSTPPVRPQSA---APPQMSAPTPPPP 1710
Score = 22.6 bits (46), Expect(2) = 2.7
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +1
Query: 826 PGGPQXFXPPXPTAPPXAXXXXRPXXPXXP 915
P P PP P+APP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 810 SPPPXAXRPAXFXPPXTHXPTPRXXPPPPXXPP 908
SPPP + +P P T P+ PPPP PP
Sbjct: 166 SPPP-SFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 810 SPPPXAXRPAXFXPPXTHXPTPRXXPPPPXXPPXPPPXP 926
+P P F PP P P PP PPP P
Sbjct: 160 APNSMVSPPPSFQPPSAAAPATSL--PSDYNPPPPPPPP 196
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 870 TPRXXPPPPXXPPXPPP 920
TP+ P P PP PPP
Sbjct: 228 TPKQADPLPAPPPPPPP 244
Score = 23.8 bits (49), Expect(2) = 0.98
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 885 PPPPXXPPXPPPXP 926
PPPP P PP P
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 23.4 bits (48), Expect(2) = 0.98
Identities = 18/73 (24%), Positives = 19/73 (26%)
Frame = +3
Query: 690 PPTXLXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPXTHXP 869
P T L N PP PP PP P + P
Sbjct: 179 PATSLPSDYNPPPP---PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPL 235
Query: 870 TPRXXPPPPXXPP 908
PPPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/80 (25%), Positives = 22/80 (27%)
Frame = +1
Query: 679 PXPPPPXXXXSXXTXAPPXPXLPTPPXPXXXXXXXXXXXXXXXXXXXXXPGGPQXFXPPX 858
P PP P T APP P +P P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 859 PTAPPXAXXXXRPXXPXXPP 918
P+ P P P PP
Sbjct: 188 PSLPSAVP----PMPPKVPP 203
Score = 29.5 bits (63), Expect = 0.71
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Frame = +3
Query: 678 PXXP-PPTXLXLXANXXPPLXXPPHP---PXXXXXXXXXXXXXXSXXXSPPPXAXRPAXF 845
P P PPT + PP PP P P S PP A A
Sbjct: 125 PSAPAPPTP---QSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 846 XPPXTHXPTPRXXPPPPXXPPXPP 917
P + P PP P P PP
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.1 bits (62), Expect = 0.93
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 9/89 (10%)
Frame = +3
Query: 687 PPPTXLXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAX---RPAXFXPPX 857
P P+ L A P+ PP P S P A RP+ F PP
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPA 225
Query: 858 THXPTPRXXPP--PPXXPPXP----PPXP 926
H P P P P P PP P
Sbjct: 226 GHAPNVTSESPKFPNRGPSIPSASVPPVP 254
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 810 SPPPXAXRPAXFXPPXTHXPTPRXXPPPPXXPPXPPPXP 926
SPPP PA P P P P P P PPP P
Sbjct: 731 SPPPPP--PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +3
Query: 816 PPXAXRPAXFXPPXTHXPTPRXXPPPP----XXPPXPPPXP 926
P A P PP P PPPP PP PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 25.4 bits (53), Expect(2) = 0.59
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 826 PGGPQXFXPPXPTAPPXAXXXXRPXXPXXPP 918
P P PP P PP P P PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 22.6 bits (46), Expect(2) = 0.59
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 685 PPPPXXXXSXXTXAPPXPXLPTPPXP 762
PPPP T AP +P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAP 756
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = -2
Query: 917 GGXXGXXGRXXXXAXGGAVGXGGXKXCGPPGXXGRGGXXGGRXVGV*GGXG 765
GG G G G GG + G GRGG GGR G GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG-GSSGGRG 65
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -1
Query: 918 GGGXGAXWAXXAXRXGWGXGXGG--GEXLRAAXXXGAGRXGXRAXGGCLRGXXGG 760
GG G R G+G G GG G A GR G R G G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 925 GXGGGXGGXXGGG-GXXRGVGXWVXGGXXXAGRXAXGGG 812
G GGG GG GGG G RG G GG GR GG
Sbjct: 27 GFGGGRGGARGGGRGGARG-GRGGRGG-ARGGRGGSSGG 63
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 915 GGXGAXWAXXAXRXGWGXGXGGGEXLRAAXXXGAGRXGXRAXGGCLRGXXGG 760
GG G G G GGG G R G GG RG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA-RGGRGG 59
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = +3
Query: 678 PXXPPPTXLXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPX 857
P P P L A PP P PP S +PP A PA
Sbjct: 415 PPVPTPPSLPPSA---PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAA----- 466
Query: 858 THXPTPRXXPPPPXXPPXPPPXP 926
P P P PP P P P
Sbjct: 467 --PPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 5.0
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Frame = +3
Query: 678 PXXPPPTX----LXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXF 845
P PPP+ L AN P PP PP S PPP +
Sbjct: 290 PPLPPPSSRVSAAALAANKKRP--PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 846 XPPXTHXPTPRXXPPPPXXPPXPPPXPR 929
P R PPPP P P R
Sbjct: 348 AGSIPLPPQGRSAPPPPP-PRSAPSTGR 374
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Frame = +3
Query: 813 PPPXAXRPAXFXPPXT--HXPTPRXXPPPPXXPP---XPPP 920
PPP +P PP H P PPP P PPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 5/83 (6%)
Frame = +3
Query: 687 PPPTXLXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPXT-- 860
PPP PP P H PPP P PP
Sbjct: 221 PPPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 278
Query: 861 HXPTPRXXPPPPXXPP---XPPP 920
H P PPP P PPP
Sbjct: 279 HEPGEHMPPPPMHHEPGEHMPPP 301
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 5/83 (6%)
Frame = +3
Query: 687 PPPTXLXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPXT-- 860
PPP PP P H PPP P PP
Sbjct: 247 PPPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 304
Query: 861 HXPTPRXXPPPPXXPP---XPPP 920
H P PPP P PPP
Sbjct: 305 HEPGEHMPPPPMHHEPGEHMPPP 327
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/83 (26%), Positives = 22/83 (26%), Gaps = 5/83 (6%)
Frame = +3
Query: 687 PPPTXLXLXANXXPPLXXPPHPPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPXT-- 860
PPP PP P H PPP P PP
Sbjct: 260 PPPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 317
Query: 861 HXPTPRXXPPPPXXPP---XPPP 920
H P PPP P PPP
Sbjct: 318 HEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 836 GPPGXXGRGGXXGGRXVGV*GGXG 765
GP G GRGG GGR G GG G
Sbjct: 133 GPAGRGGRGGFRGGRG-GSRGGFG 155
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -2
Query: 914 GXXGXXGRXXXXAX-GGAVGXGGXKXCGPPGXXGRGGXXGGRXVGV*GG 771
G G GR GG+ G G G G RGG GG G GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 849 PPXTHXPTPRXXPPPPXXPPXPPPXP 926
PP P P PPP PP PP P
Sbjct: 5 PPGNPPPPP---PPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
Frame = +3
Query: 867 PTPRXXPP---PPXXPPXPPP 920
P P PP PP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 5.0
Identities = 23/81 (28%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Frame = +3
Query: 690 PPTXLXLXANXXPPLXXPPH-PPXXXXXXXXXXXXXXSXXXSPPPXAXRPAXFXPPXTHX 866
PP + L + PP+ P PP S S PP P+ P
Sbjct: 1022 PP--VPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSI--- 1076
Query: 867 PTPRXXPP---PPXXPPXPPP 920
P P PP P PP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKP 1097
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +3
Query: 819 PXAXRPAXFXPPXTHXPTPRXXPPPPXX----PPXPPP 920
P +PA PP P P PP P PP PPP
Sbjct: 1179 PPVPKPAAGVPPV---PPPSEAPPVPKPSVGVPPVPPP 1213
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 858 THXPTPRXXPPPPXXPPXP 914
T PT P PP PP P
Sbjct: 896 TSLPTIITHPTPPPPPPLP 914
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 894 PXXPPXPPPXP 926
P PP PPP P
Sbjct: 942 PAFPPPPPPPP 952
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = +3
Query: 810 SPPPXAXRPAXFXPPXTHXPTP---RXXPPPPXXPPXPP 917
+PPP P H P P + PPP PP P
Sbjct: 78 APPPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVP 116
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,137,225
Number of Sequences: 5004
Number of extensions: 30554
Number of successful extensions: 288
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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