Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_P22
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0118 - 898490-899104                                             30   2.9  
01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567     30   2.9  
01_01_1008 - 7987936-7988628,7988923-7989102                           29   3.8  

>12_01_0118 - 898490-899104
          Length = 204

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/70 (31%), Positives = 25/70 (35%)
 Frame = -1

Query: 852 GGXKTXGTGXRXXGRXXRGXGHTAQXGAXDXHXTEXPTAXXMRKRHAXRREKGGQVSGKR 673
           G      TG    G    G G  A          E   A   R+R A RR +GG  SG  
Sbjct: 131 GAAADSATGRSGGGMRGGGRGAAADSAMGTVAACEEELAGEERRRCARRRSRGGSRSG-- 188

Query: 672 QGREQESAXG 643
            G   +SA G
Sbjct: 189 DGAAADSAMG 198


>01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567
          Length = 602

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 583 VXGGXTRQXYK--DTRRFPLEAPSCALLFPTLPLTGYLSAFLPSGRV 717
           + GG T+  +K  +T  FP     CA + P+ P   +    +PSGRV
Sbjct: 336 ICGGATKNAFKLGETSTFPPALRDCARINPSKPGARWALDQMPSGRV 382


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 726 RKRHAXRREKGGQVSGKRQGREQESAXGXFQGETPG 619
           R R   RR  GG+V+G+   R +    G ++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,546,144
Number of Sequences: 37544
Number of extensions: 244625
Number of successful extensions: 638
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)