Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P19
(905 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 42 9e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.010
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.042
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.30
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.39
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 30 0.52
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.69
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.69
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.4
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.6
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.8
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.4
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 26 8.5
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 42.3 bits (95), Expect = 9e-05
Identities = 18/31 (58%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 677 PPPSXXPPXRXTP---LPLXXXPPPPPPPPP 760
PPPS PP P LP PPPPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 29.9 bits (64), Expect = 0.52
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 698 PXRXTPLPLXXXPPPPPPPPP 760
P TP P PPPPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPP 757
P PP+ P + PLP PPPP PP
Sbjct: 221 PEIPPTYTPK-QADPLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 751 PPPXXPXPXPPPPPP 795
P P P PPPPPP
Sbjct: 229 PKQADPLPAPPPPPP 243
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = +2
Query: 626 PPLIXXXCCPTXXTXPHPPPSXX----PPXRXTPLPLXXXPPPPPPPPP 760
PP P P PPP+ PP P PPPPPPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPP------PPPPPPP 760
P PPP+ P P P+ PP PPPPPPP
Sbjct: 733 PPPPPAVIVPT-PAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 751 PPPXXPXPXPPPPPP 795
PPP PPPPPP
Sbjct: 766 PPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 751 PPPXXPXPXPPPPPP 795
P P P PPPPPP
Sbjct: 754 PAPIMGGPPPPPPPP 768
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 751 PPPXXPXPXPPPPPP 795
PPP PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPP 766
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
Frame = +1
Query: 751 PPPXXPX-----PXPPPPPP 795
PPP P P PPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.010
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +2
Query: 626 PPLIXXXCCPTXXTXPHPPP---SXXPPXRXTPLPLXXXPPPPPPPP 757
PP+ P + P PPP S PP P+P PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +2
Query: 665 TXPHPPPSXXPPXRXTPLPLXXXPPPP---PPPPPXXXXP 775
T P P S PP P P PPPP PPPP P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTP----PPPPMSVPPPPSAPPMP 1724
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.042
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +2
Query: 572 PVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLPLXXXPPPPPP 751
P P P +P+ + PP+ P P PPPS PP P P PP PPP
Sbjct: 1162 PKPSVAAPPVPAPSSGI-PPVPK----PAAGVPPVPPPSEAPP---VPKPSVGVPPVPPP 1213
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +2
Query: 566 LXPVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLPLXXXPPPP 745
+ PVP V P PP+ P+ P PPPS PP P P PP P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPK----PSVGVPPVPPPSTAPP---VPTPSAGLPPVP 1230
Query: 746 PP 751
P
Sbjct: 1231 VP 1232
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/70 (30%), Positives = 25/70 (35%)
Frame = +2
Query: 542 PRXRXTXCLXPVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLP 721
P + + PVP V P PP+ P+ P P PS PP P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK----PSVAAPPVPVPSGAPP---VPKP 1145
Query: 722 LXXXPPPPPP 751
PP P P
Sbjct: 1146 SVAAPPVPAP 1155
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +2
Query: 572 PVPLXXXPV-LPSXXXXVXPPLIXXXCCP--TXXTXPHPPPSXXPPXRXTPLPLXXXPPP 742
P P PV PS V P + P + P P PS PP P P PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP---VPKPSVAAPPV 1133
Query: 743 PPP 751
P P
Sbjct: 1134 PVP 1136
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Frame = +2
Query: 572 PVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLPLXXXPPP--- 742
PVPL P PP+ P PS PP + P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 743 PPPPPPXXXXP 775
PP P P P
Sbjct: 1083 PPVPAPSGIPP 1093
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +2
Query: 572 PVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLPLXXXPPPPPP 751
PVP PV P P P PP P P+P PP P
Sbjct: 1134 PVPSGAPPV-PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Query: 752 PP 757
PP
Sbjct: 1193 PP 1194
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = +2
Query: 572 PVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLPLXXXPPPPPP 751
P P P +P V PP+ P P PP P+P PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGV-PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 752 PPPXXXXP 775
P P
Sbjct: 1231 VPTAKAPP 1238
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 653 PTXXTXPHPPPSXXPPXRXTPLPLXXXPPPPPPPPP 760
PT + P PPS +P P PPP PPP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPP 757
P PPP PLP PPPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Frame = +2
Query: 578 PLXXXPVLPSXXXXVXPPL--IXXXCCPTXXTXPHPPPSXXP---PXRXTPLPLXXXPPP 742
P P +P PPL P T P PPS P P LP+ P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 743 PPPPPPXXXXP 775
P PP P
Sbjct: 448 PLPPSAPIAPP 458
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = +2
Query: 572 PVPLXXXPVLPSXXXXVXPPLIXXXCC---PTXXTXPHPPPSXXPPXRXTPLPLXXXPPP 742
P P P P PP + P + P PP PLP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP-PAAPAP 476
Query: 743 PPPPPPXXXXP 775
PP P P P
Sbjct: 477 PPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 626 PPLIXXXCCPTXXTXPHPPPSXXPPXRXTPLPLXXXPPPPPPP 754
PP I T + P+ PP P P PP PPP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPL-----XXXPPPPPPPPPXXXXP 775
P PPP P P PL PP PPP P P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 680 PPSXXPPXRXTPLPLXXXPPPPPPPPP 760
PP P R + L PPPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPP 757
P PPPS L PPPPPPP
Sbjct: 291 PLPPPSSR--VSAAALAANKKRPPPPPPP 317
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 812 GSXXXKGGGGGGXGXGXXGGGXGGGGXXXPREGEXDGXEG 693
GS +GG GG G G G GGG R G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 759 GGGGGGGGGXXXKGRGVXRXGGXXEGGGCG 670
GG GGG GG GRG R G GG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -1
Query: 812 GSXXXKGGGGGGXGXGXXGGGXGGGGXXXPREGEXDGXEGXXKXG 678
G +GG GGG G G GGG GG G G G G
Sbjct: 20 GFNGGRGGFGGGRG-GARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 812 GSXXXKGGGGGG-XGXGXXGGGXGGGGXXXPREGEXDGXEGXXKXG 678
GS +GG GG G G GG GGG R G G G + G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR--GGRGGARGG 56
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 766 GXXGGGXGGGGXXXQGKGSXTVXRGG*RXGVWXSXRG 656
G GG GG G G+G RGG R G RG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 812 GSXXXKGGGGGGX--GXGXXGGGXGG-GGXXXPREGEXDG 702
G +GGG GG G G GG GG GG R G G
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 756 GGGGGGGGXXXKGRGVXRXGGXXEGGGCG 670
GGG GG GRG R G GG G
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 766 GXXGGGXGGGGXXXQGKGSXTVXRGG*RXG 677
G GG GG G G+G + RGG + G
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 680 PPSXXPPXRXTPLPLXXXPP--PPPPPPP 760
PP PP P P PP PPPPPPP
Sbjct: 5 PPGNPPPP---PPPPGFEPPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 674 HPPPSXXPPXRXTPLPLXXXPPPPPPP 754
+PPP PP P PPPPPPP
Sbjct: 8 NPPPPPPPPGFEPP----SQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 737 PPPPPPPPXXXXP 775
PPPPPPPP P
Sbjct: 9 PPPPPPPPGFEPP 21
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 751 PPPXXPXPXPPPPPP 795
PPP P PPPPP
Sbjct: 14 PPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Frame = +2
Query: 716 LPLXXXPPPPPPP---PPXXXXP 775
LP PPPPPPP PP P
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPP 26
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 751 PPPXXPXPXPPPPPP 795
PP P PPPPPP
Sbjct: 15 PPGFEPPSQPPPPPP 29
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 815 EGSXXXKGGGGGGXGXGXXGGGXG 744
EG GG GGG G G GGG G
Sbjct: 74 EGLNGQPGGPGGGPGEGFPGGGFG 97
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.5 bits (63), Expect = 0.69
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 734 PPPPPPPPP 760
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect = 0.69
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 734 PPPPPPPPP 760
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 698 PXRXTPLPLXXXPPPPPPPPP 760
P T LP P PPPPPP
Sbjct: 892 PNDATSLPTIITHPTPPPPPP 912
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 716 LPLXXXPPPPPPP 754
+P PPPPPPP
Sbjct: 941 MPAFPPPPPPPPP 953
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = -1
Query: 812 GSXXXKGGGGGGXG---XGXXGGGXGGGGXXXPREGEXDGXEGXXKXG 678
G +GG GG G G GGG GG R G G G + G
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 791 GGGGGXGXGXXGGGXGGGGXXXPREGEXDGXEG 693
GG GG G GGG GG R G G G
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 766 GXXGGGXGGGGXXXQGKGSXTVXRGG*RXGVWXSXRG 656
G GG GGG G GS RGG R G RG
Sbjct: 156 GNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +2
Query: 593 PVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXP--PXRXTPLPLXXXPPPPPPPPPXX 766
P P+ + PP P + P P P+ P P + P+P PPP P P
Sbjct: 128 PAPPTPQSELRPPT----SAPPRPSIPPPSPASAPPIPSKAPPIP-SSLPPPAQPAAPVK 182
Query: 767 XXP 775
P
Sbjct: 183 SPP 185
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Frame = +2
Query: 572 PVPLXXXPVLPSXXXXVXPPLIXXXCCPTXXTXPHPPPSXXPPXRXTP----LPLXXXPP 739
P P +P PP I P + P PP P + P LP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPP-IPSKAPPIPSSLP-PPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 740 PPP-PPPPXXXXP 775
PP PPPP P
Sbjct: 198 PPKVPPPPLSQAP 210
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +2
Query: 653 PTXXTXPHPPPSXXPPXRXTPLPLXXXPPPPPPPP 757
P+ P P PP P P P P PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 734 PPPPPPPP 757
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 737 PPPPPPPP 760
PPPPPP P
Sbjct: 5 PPPPPPAP 12
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/62 (37%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Frame = -1
Query: 905 GXKGGGXVGGXXGWGXXXXXXXXXXXXXGX-EGSXXXKGGGGGGXGXGXXG-----GGXG 744
G G G GG G G G EG GGG GG G G G GG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 743 GG 738
GG
Sbjct: 263 GG 264
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -1
Query: 794 GGGGGGXGXGXXG-GGXGGGGXXXPREGEXDGXEGXXKXGGVE 669
GGG GG G G GG GG G G G G GG E
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG--PGGFE 234
Score = 27.5 bits (58), Expect = 2.8
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -1
Query: 896 GGGXVGGXXGWGXXXXXXXXXXXXXGXEGSXXXKGGG-GGGXGXGXXGGGXGGGGXXXPR 720
G G GG G+G G G GG GGG G GGG GG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG--PGGFGGGLGGFGGGPGG 260
Query: 719 EGEXDGXEG 693
G G G
Sbjct: 261 FGGGPGGHG 269
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P S P + T P+ PPPPPP P
Sbjct: 216 PSYAASTQPEFQQTTSPIFSSSSTPPPPPPRPSQP 250
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEP 242
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 255
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPPXXXXP 775
P PP P P P+ P PPPP P
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 671 PHPPPSXXPPXRXTPLPLXXXPPPPPPPPP 760
P PP P P P+ P PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 734 PPPPPPPP 757
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 737 PPPPPPPP 760
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 734 PPPPPPPP 757
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 737 PPPPPPPP 760
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 794 GGGGGGXGXGXXGG-GXGGGG 735
GGG GG G G GG G GG G
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFG 245
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 759 GGGGGGGGGXXXKGRGVXRXGGXXEGGG 676
GG GGG G RG R GG GGG
Sbjct: 80 GGHYGGGEGRQNNYRG-GREGGYSNGGG 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,965,800
Number of Sequences: 5004
Number of extensions: 29967
Number of successful extensions: 563
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -