Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P17
(902 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 2.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 5.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 5.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 5.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 5.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.7
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.7
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 22 8.8
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 22 8.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 8.8
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -2
Query: 403 QNSIVCCLS--RHSYTSSSIYKMKTNEME 323
Q + VC S R ++TS Y+M T EM+
Sbjct: 388 QETHVCFFSLLRDAFTSKGEYRMSTGEMK 416
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 448 IIGWYTSQLIH---IKYKYHSNQYQKKCPTLXTYCE 546
II ++ IH KY Y++N Y KK Y E
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 448 IIGWYTSQLIH---IKYKYHSNQYQKKCPTLXTYCE 546
II ++ IH KY Y++N Y KK Y E
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 448 IIGWYTSQLIH---IKYKYHSNQYQKKCPTLXTYCE 546
II ++ IH KY Y++N Y KK Y E
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 5.0
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 448 IIGWYTSQLIH---IKYKYHSNQYQKKCPTLXTYCE 546
II ++ IH KY Y++N Y KK Y E
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 484 KYKYHSNQYQKKCPTL 531
KY Y++N Y C L
Sbjct: 97 KYNYNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 484 KYKYHSNQYQKKCPTL 531
KY Y++N Y C L
Sbjct: 97 KYNYNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 484 KYKYHSNQYQKKCPTL 531
KY Y++N Y C L
Sbjct: 97 KYNYNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 484 KYKYHSNQYQKKCPTL 531
KY Y++N Y C L
Sbjct: 97 KYNYNNNNYNNNCKKL 112
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.8 bits (44), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 567 MKYGRKLFTICXQGRTFLLILITVVFVFY 481
+ YG F TF L L VV VFY
Sbjct: 129 ISYGTLFFIYVHPSATFSLDLNKVVSVFY 157
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 567 MKYGRKLFTICXQGRTFLLILITVVFVFY 481
+ YG F TF L L VV VFY
Sbjct: 128 ISYGTLFFIYVQPSATFSLDLNKVVSVFY 156
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 484 KYKYHSNQYQKK 519
KY Y++N Y KK
Sbjct: 103 KYNYNNNNYNKK 114
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,712
Number of Sequences: 438
Number of extensions: 3214
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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