Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P16
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 36 0.059
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 36 0.059
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 36 0.059
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 35 0.078
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 35 0.10
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 35 0.10
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 34 0.18
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 33 0.24
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 32 0.73
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 31 1.3
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 30 2.2
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 30 2.9
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 29 3.9
06_01_0096 - 794148-794246,795682-796975,798960-799417 29 5.1
01_06_0704 + 31336622-31336825,31336948-31337009,31337040-313371... 29 6.8
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 35.5 bits (78), Expect = 0.059
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
F+T+ FAE YNLG+PVA F+ Q
Sbjct: 139 FNTRDFAELYNLGSPVAALFFNCQ 162
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 35.5 bits (78), Expect = 0.059
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
F+TK FAE YNLG+PVA ++ Q
Sbjct: 144 FNTKDFAELYNLGSPVAAVYFNCQ 167
Score = 28.3 bits (60), Expect = 9.0
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 130 IVPDVIPVAPTKXXELKYPSGA-IASQGNXLTPTQVXXXPSVTFEAX-AXAFYTLVFTDP 303
+V DV+ A + LK G+ S G L P+ V P V FYTLV DP
Sbjct: 16 VVGDVLD-AFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVDP 74
Query: 304 D 306
D
Sbjct: 75 D 75
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 35.5 bits (78), Expect = 0.059
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 525 VAPRFSTKKFAEKYNLGAPVAGXFYRAQ 608
V F+T+ FA +YNLGAPVA ++ Q
Sbjct: 137 VRHNFTTRAFARRYNLGAPVAAVYFNCQ 164
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 35.1 bits (77), Expect = 0.078
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
FST+ FAE YNLG+PVA ++ Q
Sbjct: 143 FSTRNFAELYNLGSPVATVYFNCQ 166
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +1
Query: 130 IVPDVI-PVAPTKXXELKYPSGAIASQGNXLTPTQVXXXPSVTFEAX-AXAFYTLVFTDP 303
IV DV+ P + Y I S G L P+ V P V FYTLV DP
Sbjct: 15 IVGDVLDPFVRITNLSVSY-GARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYTLVMVDP 73
Query: 304 D 306
D
Sbjct: 74 D 74
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 534 RFSTKKFAEKYNLGAPVAGXFYRAQ 608
RFST+ FA++++LG PVA ++ AQ
Sbjct: 142 RFSTRAFADRHDLGLPVAALYFNAQ 166
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
FST+ FAE YNLG PVA ++ Q
Sbjct: 143 FSTRDFAELYNLGLPVAAVYFNCQ 166
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 534 RFSTKKFAEKYNLGAPVAGXFYRAQ 608
RFST++FAE +LG PVA ++ AQ
Sbjct: 141 RFSTRQFAEDNDLGLPVAAVYFNAQ 165
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +1
Query: 94 MSLVAXAFEASXIVPDVIP-VAPTKXXELKYPSGAIASQGNXLTPTQVXXXPSVTFEAX- 267
MS V ++ +V+ PT Y + G+ P+ V P V +
Sbjct: 1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGD 60
Query: 268 AXAFYTLVFTDPDNYDGPELVY 333
+F+TLV TDPD GP Y
Sbjct: 61 LRSFFTLVMTDPD-VPGPSDPY 81
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 33.5 bits (73), Expect = 0.24
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +1
Query: 94 MSLVAXAFEASXIVPDVIP-VAPTKXXELKYPSGAIASQGNXLTPTQVXXXPSVTFEAX- 267
MS V ++ +VI PT Y S G+ L P+ V P V +
Sbjct: 1 MSRVLEPLVVGKVIGEVIDNFNPTVKMTATYSSNKQVFNGHELFPSAVVSKPRVEVQGGD 60
Query: 268 AXAFYTLVFTDPDNYDGPELVY 333
+F+TLV TDPD GP Y
Sbjct: 61 LRSFFTLVMTDPD-VPGPSDPY 81
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
FST++FA +LG PVA ++ AQ
Sbjct: 142 FSTRRFAADNDLGLPVAAVYFNAQ 165
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
F+T++FAE+ +LG PVA ++ AQ
Sbjct: 142 FNTRRFAEENDLGLPVAAVYFNAQ 165
Score = 31.5 bits (68), Expect = 0.96
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 181 YPSGAIASQGNXLTPTQVXXXPSVTFEAX-AXAFYTLVFTDPDNYDGPELVY 333
Y S + G+ L P+ V P V + +F+TLV TDPD GP Y
Sbjct: 31 YNSNKLVFNGHELYPSAVVSKPRVEVQGGDLRSFFTLVMTDPD-VPGPSDPY 81
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
F+T++FAE+ LG PVA ++ AQ
Sbjct: 142 FNTRQFAEENELGLPVAAVYFNAQ 165
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 181 YPSGAIASQGNXLTPTQVXXXPSVTFEAX-AXAFYTLVFTDPDNYDGPELVY 333
Y S + G+ P+ V P V + +F+TLV TDPD GP Y
Sbjct: 31 YNSNKLVFNGHEFYPSAVVSKPRVEVQGGDMRSFFTLVMTDPD-VPGPSDPY 81
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 525 VAPRFSTKKFAEKYNLGAPVAGXFYRAQ 608
V F+ + FA ++NLG PVA ++ Q
Sbjct: 135 VRQNFNLRSFARRFNLGKPVAAMYFNCQ 162
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 94 MSLVAXAFEASXIVPDVIP-VAPTKXXELKYPSGAIASQGNXLTPTQVXXXPSV--TFEA 264
MS+ IV DV+ + L Y + S G+ L P+QV P+V T
Sbjct: 1 MSMSRDPLVVGSIVGDVVDHFGASALLRLFYNHREMTS-GSELRPSQVAGEPAVQITGGR 59
Query: 265 XAXAFYTLVFTDPD 306
A YTLV DPD
Sbjct: 60 DGRALYTLVMVDPD 73
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFYRAQ 608
F+T+ FA Y+LG+PVA ++ Q
Sbjct: 142 FNTRDFAACYSLGSPVAAAYFNCQ 165
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 537 FSTKKFAEKYNLGAPVAGXFY 599
FST+ FA+ + LGAPVA F+
Sbjct: 129 FSTRGFADDHALGAPVAAAFF 149
>06_01_0096 - 794148-794246,795682-796975,798960-799417
Length = 616
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 561 FQRTSSWRNEARPSIDVFVSLFSS 490
F+RT+SW+NEA S+ FV + S+
Sbjct: 589 FKRTTSWQNEALISLSEFVGMKSA 612
>01_06_0704 +
31336622-31336825,31336948-31337009,31337040-31337171,
31337304-31337341,31337825-31337872,31338545-31338780
Length = 239
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 130 IVPDVI-PVAPTKXXELKYPSGAIASQGNXLTPTQVXXXPSVTFEAX-AXAFYTLVFTDP 303
++ DV+ P PT + Y + + G L P+ P V FYTLV DP
Sbjct: 15 VIHDVLDPFRPTMPLRITYNDRLLLA-GAELKPSATVHKPRVDIGGTDLRVFYTLVLVDP 73
Query: 304 D 306
D
Sbjct: 74 D 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,842,943
Number of Sequences: 37544
Number of extensions: 214569
Number of successful extensions: 523
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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