Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P12
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1022 - 21778315-21779007 32 0.70
02_05_0795 - 31792231-31794780 32 0.70
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 31 1.2
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 30 2.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.8
04_03_0904 + 20717005-20718087 30 2.8
01_06_0590 + 30453407-30455442,30456313-30456586,30456992-30457318 30 2.8
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563 29 3.7
04_01_0146 + 1701744-1701860,1702036-1702112,1702247-1702344,170... 29 3.7
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 29 3.7
12_02_0434 + 19025539-19026027,19026474-19027553 29 6.5
05_05_0392 + 24629528-24630442 29 6.5
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 6.5
03_05_0352 + 23395976-23396040,23396220-23396286,23396753-233971... 29 6.5
>04_03_1022 - 21778315-21779007
Length = 230
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 379 PSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPT 492
P H P TPAP P P + P H H + P P+
Sbjct: 66 PPNYHPPHTPAPAPAPGPYIPPHHPHHHHPPTPAPAPS 103
>02_05_0795 - 31792231-31794780
Length = 849
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 271 EGREDASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAP 414
EG A+ ++G +GY A D P++ +A +P PT+ AP
Sbjct: 47 EGAAAAAGTIEGEAGYAAADADPMEDEAADEAGAAEPMEDDPPTSSAP 94
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 322 APDGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRL 432
+P P+ + I G+ P GAH P PAP P P L
Sbjct: 214 SPANNPL-LGSIPKPGGFPPLGAHAPFQPAPTPVPPL 249
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +1
Query: 307 SSGY--TAPDGTPIQITYIADANGYQPSGAHLPTTPAPXP-NPRLHRPGHRVHQNSPTQA 477
S GY T+P +P Y + Y PS A + A P +PRL SPT
Sbjct: 1722 SPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSP 1781
Query: 478 RGRPTYLSY 504
PT SY
Sbjct: 1782 TYSPTSPSY 1790
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +1
Query: 319 TAPDGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPT 492
++P T +Q + D+ P TTP P P P RP R H+ P PT
Sbjct: 41 SSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPT 98
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = +1
Query: 316 YTAPDGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRP 489
YT P TP TY P PT PA P P + P + +P + +P
Sbjct: 73 YTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKPQP 130
>01_06_0590 + 30453407-30455442,30456313-30456586,30456992-30457318
Length = 878
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = -2
Query: 240 DSVAGLILVLVFVRENVSILRHNLGISFASAHDVRNVSDGYRDQSEEDVSSHFECVC 70
D+ A + + + EN LRH + S+HDV S Y E HF C
Sbjct: 516 DTTAEAMNESIALSENEKQLRHEKHYRYVSSHDVAYWSKSYIHDLERSCRDHFRRRC 572
>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
Length = 571
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +1
Query: 301 QGSSGYTAPD---GTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPT 471
QG+S AP G P+Q QP A P P P P+ H P NS T
Sbjct: 491 QGNSSRGAPRPRYGQPMQYHQSLTQANRQPGYAPRPQINRPAPQPQKHAPSGNTAPNSVT 550
>04_01_0146 +
1701744-1701860,1702036-1702112,1702247-1702344,
1704073-1704228,1704671-1705290,1705397-1705458,
1705551-1705941,1706404-1706575,1706686-1707212
Length = 739
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 370 RWRQQCK*SEWEYHQGQCSRLNLGRRWMHPH 278
+W+ QC+ E + QC+R +G RW H
Sbjct: 169 KWKGQCQAGE-AFRSNQCNRKIIGARWYDKH 198
>01_06_0481 -
29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 262 LVNEGREDASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPXPNPRLHRP 441
++NEGR + SI V G SG + T + + Y+A G +G NP L
Sbjct: 144 MMNEGRNN-SILVSGESGAGKTETTKLLMRYLAYLGGRSGTGGRTVEQQVLESNPVLEAF 202
Query: 442 GH 447
G+
Sbjct: 203 GN 204
>12_02_0434 + 19025539-19026027,19026474-19027553
Length = 522
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 434 IARAIEYIRTHPPKPEVGQRI 496
++RAIEY+ THP +P + + I
Sbjct: 334 VSRAIEYLHTHPTRPVIHRDI 354
>05_05_0392 + 24629528-24630442
Length = 304
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 376 QPSGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRP 489
+P G +P+P P PR PG R + SP+ A RP
Sbjct: 165 RPGGGR--ASPSPPPPPR-REPGERPTRRSPSPATKRP 199
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 334 TPIQITYIADANGYQP-SGAHLPTTPAPXPNPRLHRPGHRVHQNSPT-QARGRPTY 495
+P Y + GY P S ++ P++P+ P+ + P H +SP + PTY
Sbjct: 1781 SPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTY 1836
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 319 TAPDGTPIQITYIADANGYQP-SGAHLPTTPAPXPNPRLHRPGHRVHQNSPTQARGRPTY 495
++P +P ++Y + Y P S + PT+ A P + P + SPT PT
Sbjct: 1658 SSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTS 1717
Query: 496 LSY 504
SY
Sbjct: 1718 PSY 1720
>03_05_0352 +
23395976-23396040,23396220-23396286,23396753-23397122,
23397229-23397401,23397751-23397996
Length = 306
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 170 KLCRKMLTFSRTNTSTNIRPATESVARNKERS*TRAVRMHPSPSKVQAATLPLMVLPFR 346
K+C K + S + +R + + + K+R +R + PS ++A +P +LP R
Sbjct: 126 KVCEKPVDMSGRSYDIAMRNSQDEKKKRKQRDISRQGTVKPSEEGLKAELVPGCILPSR 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,879,324
Number of Sequences: 37544
Number of extensions: 405062
Number of successful extensions: 1501
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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