Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_P10
         (937 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589...    49   5e-06
02_01_0160 + 1116160-1116678                                           48   1e-05
10_01_0309 + 3417602-3418147                                           47   2e-05
09_06_0359 + 22508900-22509439                                         47   2e-05
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924...    44   2e-04
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558...    42   5e-04
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15...    42   5e-04
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688...    39   0.007
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942...    36   0.035
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515...    36   0.046
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870...    36   0.046
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594...    36   0.061
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582...    34   0.19 
06_01_0214 + 1634171-1634173,1634263-1634742                           32   0.57 
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526...    29   7.0  

>06_03_1341 +
           29458085-29458198,29458448-29458526,29458923-29458970,
           29459064-29459087,29459554-29459736,29459845-29459920,
           29460020-29460158
          Length = 220

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 29/71 (40%), Positives = 33/71 (46%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFITTVKXSXLDXXXXXXXXXXXXLALVKXXXXFGXQSGKXS 605
           GPG+LSMANAG DT GS  FITTV  S LD            + +V      G QSG   
Sbjct: 148 GPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSPK 207

Query: 606 XXXXIXXCGPI 638
               I   G +
Sbjct: 208 SKVVIADSGEL 218


>02_01_0160 + 1116160-1116678
          Length = 172

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 26/70 (37%), Positives = 33/70 (47%)
 Frame = +3

Query: 429 PGVLSMANAGADTXGSXXFITTVKXSXLDXXXXXXXXXXXXLALVKXXXXFGXQSGKXSX 608
           PG+LSMANAG +T GS  FI TV  S LD            + +VK     G + G  + 
Sbjct: 102 PGILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAK 161

Query: 609 XXXIXXCGPI 638
              I  CG +
Sbjct: 162 PVVIADCGQL 171


>10_01_0309 + 3417602-3418147
          Length = 181

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/69 (39%), Positives = 31/69 (44%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFITTVKXSXLDXXXXXXXXXXXXLALVKXXXXFGXQSGKXS 605
           GPGV+SMANAG +T GS  FIT  K   LD            +  V+     G  SGK  
Sbjct: 111 GPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTV 170

Query: 606 XXXXIXXCG 632
               I  CG
Sbjct: 171 KPVVITDCG 179


>09_06_0359 + 22508900-22509439
          Length = 179

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 26/71 (36%), Positives = 33/71 (46%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFITTVKXSXLDXXXXXXXXXXXXLALVKXXXXFGXQSGKXS 605
           GPGVLSMANAG +T GS  FI T + + LD              +V+     G  SG  +
Sbjct: 103 GPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTA 162

Query: 606 XXXXIXXCGPI 638
               I  CG +
Sbjct: 163 ERVLIEDCGQL 173


>01_02_0015 +
           10191793-10191957,10192085-10192229,10192331-10192419,
           10193009-10193063,10193607-10193692,10194006-10194065
          Length = 199

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 21/27 (77%), Positives = 21/27 (77%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFITTVKXS 506
           GPGVLSMANAG DT GS  FI TVK S
Sbjct: 156 GPGVLSMANAGPDTNGSQFFICTVKFS 182


>06_03_1340 +
           29455210-29455290,29455493-29455571,29455767-29455814,
           29455908-29455931,29456433-29456615,29456730-29456805,
           29456937-29457072
          Length = 208

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 26/70 (37%), Positives = 31/70 (44%)
 Frame = +3

Query: 429 PGVLSMANAGADTXGSXXFITTVKXSXLDXXXXXXXXXXXXLALVKXXXXFGXQSGKXSX 608
           PG+LSMAN   DT GS  FITTVK + LD            + +V      G QSG    
Sbjct: 138 PGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTPRS 197

Query: 609 XXXIXXCGPI 638
              I   G +
Sbjct: 198 KVLISDSGEL 207


>05_01_0022 +
           154399-154428,154528-154716,155469-155619,155724-155812,
           156391-156445,156533-156618,156705-156857
          Length = 250

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 20/30 (66%), Positives = 22/30 (73%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFITTVKXSXLD 515
           GPGV+SMANAG +T GS  FI TVK   LD
Sbjct: 176 GPGVVSMANAGPNTNGSQFFICTVKTPWLD 205


>02_05_0830 +
           32066419-32066676,32067779-32067820,32068375-32068875,
           32069048-32069135,32069251-32069303,32069499-32069603,
           32069886-32069961,32070038-32070075,32070162-32070242,
           32070353-32070364
          Length = 417

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +3

Query: 432 GVLSMANAGADTXGSXXFITTVKXSXLD 515
           G+LSMANAG DT GS  FITT +   LD
Sbjct: 147 GMLSMANAGPDTNGSQFFITTTRTPHLD 174


>08_02_1578 -
           27992848-27992893,27993431-27993515,27994107-27994240,
           27994579-27994640,27994736-27994831,27994952-27995023
          Length = 164

 Score = 36.3 bits (80), Expect = 0.035
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFITTVKXSXLD 515
           G G+LSMANAG +T GS  FIT      LD
Sbjct: 92  GAGILSMANAGPNTNGSQFFITLAPCQSLD 121


>09_06_0098 +
           20850535-20850612,20851258-20851333,20851474-20851521,
           20851758-20851781,20851875-20851994,20852235-20852310,
           20852385-20852547
          Length = 194

 Score = 35.9 bits (79), Expect = 0.046
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +3

Query: 435 VLSMANAGADTXGSXXFITTVKXSXLD 515
           V++MAN+G D+ GS  +ITT+K S LD
Sbjct: 117 VIAMANSGPDSNGSQFYITTIKTSWLD 143


>08_02_1563 +
           27886202-27886446,27886533-27886618,27886942-27887030,
           27887193-27887432,27887527-27887648,27888103-27888178,
           27888276-27888383,27888465-27888641,27888959-27889176,
           27889313-27889445,27889584-27889807,27890052-27890205,
           27890297-27890380
          Length = 651

 Score = 35.9 bits (79), Expect = 0.046
 Identities = 18/29 (62%), Positives = 19/29 (65%)
 Frame = +3

Query: 429 PGVLSMANAGADTXGSXXFITTVKXSXLD 515
           P  LSMANAG +T GS  FITTV    LD
Sbjct: 579 PFTLSMANAGPNTNGSQFFITTVATPWLD 607


>06_01_0798 -
           5944815-5944888,5945084-5945243,5945319-5945356,
           5945438-5945513,5946114-5946218,5947486-5947986,
           5948638-5948710,5949550-5949593,5949938-5950174
          Length = 435

 Score = 35.5 bits (78), Expect = 0.061
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +3

Query: 432 GVLSMANAGADTXGSXXFITTVKXSXLD 515
           G+LSMAN+G +T GS  FITT +   LD
Sbjct: 165 GMLSMANSGPNTNGSQFFITTTRTPHLD 192


>02_01_0782 +
           5827364-5827441,5827733-5827787,5828761-5828849,
           5829167-5829191,5829645-5829683,5830316-5830433,
           5830857-5831023,5831155-5831518,5831589-5831701,
           5832185-5832310,5832436-5833339,5833694-5834036
          Length = 806

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +3

Query: 432 GVLSMANAGADTXGSXXFITTVKXSXLD 515
           G+LSMANAG +T GS  FIT    S LD
Sbjct: 107 GLLSMANAGPNTNGSQFFITFKHNSRLD 134


>06_01_0214 + 1634171-1634173,1634263-1634742
          Length = 160

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +3

Query: 432 GVLSMANAGADTXGSXXFITTVKXSXLD 515
           GV+SMAN+G +T GS  FIT  K   L+
Sbjct: 85  GVMSMANSGPNTNGSQFFITYAKQPHLN 112


>03_02_0048 -
           5265595-5265783,5265882-5265992,5266259-5266547,
           5266647-5266903,5266995-5267356,5267447-5267522,
           5267618-5267707,5267800-5267891,5267995-5268098,
           5268191-5268253,5268609-5268736
          Length = 586

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 426 GPGVLSMANAGADTXGSXXFI 488
           G GV+SMAN+G  T GS  FI
Sbjct: 427 GRGVVSMANSGPHTNGSQFFI 447


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,555,508
Number of Sequences: 37544
Number of extensions: 102113
Number of successful extensions: 106
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)