Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_P08
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624...   176   2e-44
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408...   171   5e-43
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407...   170   1e-42

>11_01_0740 +
           6243517-6243526,6244822-6245323,6245415-6245496,
           6245741-6245821
          Length = 224

 Score =  176 bits (429), Expect = 2e-44
 Identities = 83/129 (64%), Positives = 97/129 (75%)
 Frame = +1

Query: 322 KXCGKXQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGXPIMS 501
           K  GK  FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IG  ++S
Sbjct: 78  KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 137

Query: 502 VRSSDRWKAXVIEALRRAKFXFPGRQKIYVSKKWGFTKYERDEFEKLRXEGRLXNDGCIV 681
           VR  +       EALRRAKF FPGRQKI  S+KWGFTK+ R+E+ KL+ EGR+ +DG   
Sbjct: 138 VRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNA 197

Query: 682 QYRPEHGPL 708
           Q    HG L
Sbjct: 198 QLLGSHGRL 206



 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 35/72 (48%), Positives = 43/72 (59%)
 Frame = +3

Query: 156 CRGVPXPKLRIFDLGXQRAPVXXFPLCVHLVSDXXXQLSSXALEAGRICCNKXLXKXLRK 335
           CRGVP PK+RI+D+G ++  V  FP CVHLVS     +SS ALEA RI CNK + K   K
Sbjct: 23  CRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGK 82

Query: 336 GSVPYPHETSPF 371
            +        PF
Sbjct: 83  DAFHLRVRVHPF 94



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 92  GRRPARCXRXCXXXPXPXSXFLSG 163
           GRRPARC R     P P S +  G
Sbjct: 2   GRRPARCYRQIKNKPYPKSRYCRG 25


>05_01_0490 +
           4083768-4083775,4083845-4084336,4084441-4084522,
           4086671-4087357,4087555-4087813,4088435-4088558,
           4089474-4089564
          Length = 580

 Score =  171 bits (417), Expect = 5e-43
 Identities = 79/117 (67%), Positives = 91/117 (77%)
 Frame = +1

Query: 322 KXCGKXQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGXPIMS 501
           K  GK  FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IG  ++S
Sbjct: 74  KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 133

Query: 502 VRSSDRWKAXVIEALRRAKFXFPGRQKIYVSKKWGFTKYERDEFEKLRXEGRLXNDG 672
           VR          EALRRAKF FPGRQKI  S+KWGFTK+ RDE+ +L+ EGR+  DG
Sbjct: 134 VRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190



 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 33/72 (45%), Positives = 42/72 (58%)
 Frame = +3

Query: 156 CRGVPXPKLRIFDLGXQRAPVXXFPLCVHLVSDXXXQLSSXALEAGRICCNKXLXKXLRK 335
           CRGVP PK+RI+D+G ++  V  F  CVHLVS     ++S ALEA RI CNK + K   K
Sbjct: 19  CRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGK 78

Query: 336 GSVPYPHETSPF 371
            +        PF
Sbjct: 79  DAFHLRVRVHPF 90


>03_02_0897 -
           12239375-12239458,12240035-12240116,12240213-12240714,
           12241150-12241303,12241458-12241629,12242237-12242443,
           12242926-12243323
          Length = 532

 Score =  170 bits (414), Expect = 1e-42
 Identities = 79/127 (62%), Positives = 94/127 (74%)
 Frame = +1

Query: 322 KXCGKXQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGXPIMS 501
           K  GK  FH+R+  HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIG  ++S
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLS 444

Query: 502 VRSSDRWKAXVIEALRRAKFXFPGRQKIYVSKKWGFTKYERDEFEKLRXEGRLXNDGCIV 681
           VR  D   A   EALRRAKF FPGRQ++  S KWGFT+++RDE+ KL+ EGR+  DG   
Sbjct: 445 VRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNA 504

Query: 682 QYRPEHG 702
           +    HG
Sbjct: 505 KLLTRHG 511



 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 34/60 (56%), Positives = 40/60 (66%)
 Frame = +3

Query: 156 CRGVPXPKLRIFDLGXQRAPVXXFPLCVHLVSDXXXQLSSXALEAGRICCNKXLXKXLRK 335
           CRGVP PK+RIFD+G ++     FPLCVHLVS     +SS ALEA RI CNK + K   K
Sbjct: 330 CRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGK 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,824,620
Number of Sequences: 37544
Number of extensions: 326704
Number of successful extensions: 657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)