Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P07
(968 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378... 131 9e-31
08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161... 130 2e-30
02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63... 130 2e-30
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 3.5
02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486 29 4.2
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 5.6
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 7.4
08_01_0059 - 394001-394708 29 7.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 23 7.9
11_01_0387 + 2922208-2922704,2922956-2923088,2923487-2923549,292... 28 9.7
>02_05_1204 +
34936696-34936698,34936809-34936944,34937794-34937895,
34938153-34938199
Length = 95
Score = 131 bits (316), Expect = 9e-31
Identities = 57/88 (64%), Positives = 67/88 (76%)
Frame = +3
Query: 81 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTG 260
M KGT SFGKRRNKTHTLC RCGR S+H+QKS C+ CGYPAA++R Y+WSVKA R KTTG
Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTG 60
Query: 261 TGRMRHLKIVXXXXXXGFKEGKPTPPKK 344
TGRMR+L+ V F+EG P+K
Sbjct: 61 TGRMRYLRHVPKRFKSNFREGTEAAPRK 88
>08_01_0195 +
1612938-1613003,1613026-1613161,1614624-1614725,
1614833-1614876
Length = 115
Score = 130 bits (314), Expect = 2e-30
Identities = 56/94 (59%), Positives = 70/94 (74%)
Frame = +3
Query: 63 IVKSXXMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAK 242
++ S + KGT SFGKRRNKTHTLC RCGR S+H+QKS C+ CGYPAA++R Y+WSVKA
Sbjct: 16 LLHSSNVGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAI 75
Query: 243 RXKTTGTGRMRHLKIVXXXXXXGFKEGKPTPPKK 344
R KTTGTGRMR+++ V F+EG P+K
Sbjct: 76 RRKTTGTGRMRYMRHVPRRFKSNFREGTEATPRK 109
>02_01_0089 +
633642-633644,633728-633863,635356-635457,635565-635608
Length = 94
Score = 130 bits (314), Expect = 2e-30
Identities = 56/88 (63%), Positives = 67/88 (76%)
Frame = +3
Query: 81 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTG 260
M KGT SFGKRRNKTHTLC RCGR S+H+QKS C+ CGYPAA++R Y+WSVKA R KTTG
Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTG 60
Query: 261 TGRMRHLKIVXXXXXXGFKEGKPTPPKK 344
TGRMR+++ V F+EG P+K
Sbjct: 61 TGRMRYMRHVPRRFKSNFREGTEATPRK 88
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 26.2 bits (55), Expect(2) = 3.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 850 PXPPXPPPXXPXXXXPP 900
P PP PPP P PP
Sbjct: 603 PPPPPPPPILPNRSVPP 619
Score = 21.8 bits (44), Expect(2) = 3.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 838 PXXXPXPPXPPP 873
P P PP PPP
Sbjct: 563 PPPPPPPPPPPP 574
>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
Length = 296
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 838 PXXXPXPPXPPPXXPXXXXPPXAGH 912
P P PP PPP P PP H
Sbjct: 7 PPPPPAPPSPPPALPCDPMPPPPRH 31
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 838 PXXXPXPPXPPPXXPXXXXPPXAGHLRP 921
P P PP PP P PP G+ +P
Sbjct: 132 PPHPPHPPDHPPPPPPCRVPPPPGYRQP 159
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 850 PXPPXPPPXXPXXXXPPXAGHLR 918
P PP PPP P PP LR
Sbjct: 28 PPPPHPPPPPPLEPAPPSTPQLR 50
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 838 PXXXPXPPXPPPXXPXXXXPPXAGHLRP 921
P P PP PP P PP + +RP
Sbjct: 7 PRRAPPPPATPPPPPRRAPPPPSPPIRP 34
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +2
Query: 476 PXILPLPXGXXAPXPXXXPSACXXPPHNXXXXPXXXXIXXXPGXPPALXS 625
P LP P P P P A P + P + P PPA S
Sbjct: 59 PPPLPTPT-VTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASIS 107
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 680 SXXPAPPXPPXPRXXXXXXPALHXP 754
S PAPP PP P P P
Sbjct: 107 SPTPAPPLPPPPAPAPPPTPTPKFP 131
>11_01_0387 +
2922208-2922704,2922956-2923088,2923487-2923549,
2923564-2923680,2925040-2925399
Length = 389
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 850 PXPPXPPPXXP-XXXXPPXAGHLR 918
P PP PPP P PP HLR
Sbjct: 64 PTPPPPPPALPQAAPRPPGGAHLR 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,793,321
Number of Sequences: 37544
Number of extensions: 314242
Number of successful extensions: 2252
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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