Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P06
(965 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 63 2e-10
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 63 2e-10
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 63 2e-10
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 61 1e-09
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 61 1e-09
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 61 1e-09
M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. 61 1e-09
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 60 2e-09
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 60 2e-09
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 60 2e-09
M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. 60 2e-09
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 57 2e-08
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 57 2e-08
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 55 7e-08
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 47 2e-05
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 47 2e-05
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 41 0.001
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 40 0.003
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 38 0.014
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 35 0.075
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.93
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 31 0.93
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 31 1.6
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 31 1.6
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 30 2.1
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 30 2.1
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 30 2.1
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 29 3.7
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y CA+++ GKR++E+PP FA+S AY N MLIT ESGAG N
Sbjct: 126 RLPIYTDSCARMFMGKRKTEMPPHLFAVSDEAYRNMLQDHENQSMLITGESGAGKTENTK 185
Query: 758 KVXAXXXXXXAS 793
KV AS
Sbjct: 186 KVICYFAAVGAS 197
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y CA+++ GKR++E+PP FA+S AY N MLIT ESGAG N
Sbjct: 126 RLPIYTDSCARMFMGKRKTEMPPHLFAVSDEAYRNMLQDHENQSMLITGESGAGKTENTK 185
Query: 758 KVXAXXXXXXAS 793
KV AS
Sbjct: 186 KVICYFAAVGAS 197
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y CA+++ GKR++E+PP FA+S AY N MLIT ESGAG N
Sbjct: 129 RLPIYTDSCARMFMGKRKTEMPPHLFAVSDEAYRNMLQDHENQSMLITGESGAGKTENTK 188
Query: 758 KVXAXXXXXXAS 793
KV AS
Sbjct: 189 KVICYFAAVGAS 200
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/76 (42%), Positives = 39/76 (51%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 129 RLPIYTDSVARMFMGKRRTEMPPHLFAVSDQAYRYMLQDHENQSMLITGESGAGKTENTK 188
Query: 758 KVXAXXXXXXASPXTA 805
KV AS A
Sbjct: 189 KVICYFATVGASQKAA 204
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/76 (42%), Positives = 39/76 (51%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 129 RLPIYTDSVARMFMGKRRTEMPPHLFAVSDQAYRYMLQDHENQSMLITGESGAGKTENTK 188
Query: 758 KVXAXXXXXXASPXTA 805
KV AS A
Sbjct: 189 KVICYFATVGASQKAA 204
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/76 (42%), Positives = 39/76 (51%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 129 RLPIYTDSVARMFMGKRRTEMPPHLFAVSDQAYRYMLQDHENQSMLITGESGAGKTENTK 188
Query: 758 KVXAXXXXXXASPXTA 805
KV AS A
Sbjct: 189 KVICYFATVGASQKAA 204
>M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein.
Length = 251
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/76 (42%), Positives = 39/76 (51%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 15 RLPIYTDSVARMFMGKRRTEMPPHLFAVSDQAYRYMLQDHENQSMLITGESGAGKTENTK 74
Query: 758 KVXAXXXXXXASPXTA 805
KV AS A
Sbjct: 75 KVICYFATVGASQKAA 90
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 126 RLPIYTDSVARMFMGKRRTEMPPHLFAVSDEAYRNMLQNHENQSMLITGESGAGKTENTK 185
Query: 758 KV 763
KV
Sbjct: 186 KV 187
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 126 RLPIYTDSVARMFMGKRRTEMPPHLFAVSDEAYRNMLQNHENQSMLITGESGAGKTENTK 185
Query: 758 KV 763
KV
Sbjct: 186 KV 187
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 126 RLPIYTESVARMFMGKRRTEMPPHLFAVSDEAYRNMLQNHENQSMLITGESGAGKTENTK 185
Query: 758 KV 763
KV
Sbjct: 186 KV 187
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/72 (43%), Positives = 38/72 (52%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y ++Y GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 126 RLPIYSESVCQMYLGKRRNEMPPHLFAVSDEAYRNMTNDRENQSMLITGESGAGKTENTK 185
Query: 758 KVXAXXXXXXAS 793
KV + AS
Sbjct: 186 KVISYFAMVGAS 197
>M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein.
Length = 260
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+++ GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 15 RLPIYTDSVARIFMGKRRTEMPPHLFAVSDEAYRNMLQNHENQSMLITGESGAGKTENTK 74
Query: 758 KV 763
KV
Sbjct: 75 KV 76
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
protein K12F2.1 protein.
Length = 1969
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y K + GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 131 RLPIYSESVIKHFMGKRRNEMPPHLFAVSDEAYRNMVQDKENQSMLITGESGAGKTENTK 190
Query: 758 KV 763
KV
Sbjct: 191 KV 192
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
3 protein.
Length = 1969
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y K + GKRR+E+PP FA+S AY N MLIT ESGAG N
Sbjct: 131 RLPIYSESVIKHFMGKRRNEMPPHLFAVSDEAYRNMVQDKENQSMLITGESGAGKTENTK 190
Query: 758 KV 763
KV
Sbjct: 191 KV 192
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/62 (45%), Positives = 34/62 (54%)
Frame = +2
Query: 584 PVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXXKV 763
P+Y A +Y KRR+E+PP FA+S A+ N MLIT ESGAG N KV
Sbjct: 132 PIYTDSVASMYVNKRRAEMPPHLFAVSDEAFRNMMSDKENQSMLITGESGAGKTENTKKV 191
Query: 764 XA 769
A
Sbjct: 192 IA 193
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+ ++ K+R E+PP FA++ AY + +L T ESGAG N
Sbjct: 131 RIPIYTDTIAEQFKCKKRKEMPPHIFAVADEAYRSMLQERDDQSILCTGESGAGKTENTK 190
Query: 758 KV 763
KV
Sbjct: 191 KV 192
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+ ++ K+R E+PP FA++ AY + +L T ESGAG N
Sbjct: 131 RIPIYTDTIAEQFKCKKRKEMPPHIFAVADEAYRSMLQERDDQSILCTGESGAGKTENTK 190
Query: 758 KV 763
KV
Sbjct: 191 KV 192
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
R P+Y A+ ++ K+R E+PP FA++ AY + +L T ESGAG N
Sbjct: 131 RIPIYTDTIAEQFKCKKRKEMPPHIFAVADEAYRSMLQERDDQSILCTGESGAGKTENTK 190
Query: 758 KV 763
KV
Sbjct: 191 KV 192
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXX 757
+ P+Y + ++GK+R E+PP FAI+ AY + +L T ESGAG N
Sbjct: 123 KLPIYSEDLIEEFKGKKRHEMPPHIFAIADTAYRSMLQEREDQSILCTGESGAGKTENTK 182
Query: 758 KV 763
KV
Sbjct: 183 KV 184
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 587 VYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
+Y ++Y+ KR E+PP FAI+ AY N ++I+ ESGAG
Sbjct: 110 IYTADEIRMYKRKRIGELPPHIFAIADNAYTNMRREKKNQSVIISGESGAG 160
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 581 FPVYXTRCAKLY-RGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
FP+Y + A+LY + KR +PP FAI+ Y N ++I+ ESG+G
Sbjct: 213 FPIYNPKYARLYFQSKRLGSLPPHIFAIADVCYHNMLRIKENQCVVISGESGSG 266
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 584 PVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXNXXKV 763
P+Y +LY+ ++++PP ++++ A+ N +LIT ESGAG N K+
Sbjct: 130 PIYSDEVKQLYQ--LQNDLPPHVYSVAQNAFHGILKGGRNQSILITGESGAGKTENTKKI 187
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 35.1 bits (77), Expect = 0.075
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 566 PLTLRFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
P L +Y K YRGK ++ P FAI+ AY + ++++ ESGAG
Sbjct: 106 PYQLIDGLYSPETIKEYRGKSLGQMEPHIFAIADKAYREMRRIKTSQSIIVSGESGAG 163
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 590 YXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
Y + K YRGK + P FAI+ +Y + ++++ ESGAG
Sbjct: 115 YSLQKIKEYRGKSLGQKEPHIFAIADKSYREMIRHRKSQSIIVSGESGAG 164
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 590 YXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
Y + K YRGK + P FAI+ +Y + ++++ ESGAG
Sbjct: 115 YSLQKIKEYRGKSLGQKEPHIFAIADKSYREMIRHRKSQSIIVSGESGAG 164
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 587 VYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
+Y Y+G+ E P FAI+ AY + ++I+ ESGAG
Sbjct: 59 IYEKSTVDQYKGREIYERAPHVFAIADAAYRSMKRFGRDSCIVISGESGAG 109
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 587 VYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
+Y Y+G+ E P FAI+ AY + ++I+ ESGAG
Sbjct: 59 IYEKSTVDQYKGREIYERAPHVFAIADAAYRSMKRFGRDSCIVISGESGAG 109
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 587 VYXTRCAKLYRGKRRS--EVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
+Y ++YRG +S E+ P FA++ A+ + ++++ ESGAG
Sbjct: 157 IYGEEIIQVYRGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSGESGAG 209
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 587 VYXTRCAKLYRGKRRS--EVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
+Y ++YRG +S E+ P FA++ A+ + ++++ ESGAG
Sbjct: 157 IYGEEIIQVYRGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSGESGAG 209
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 587 VYXTRCAKLYRGKRRS--EVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAG 739
+Y ++YRG +S E+ P FA++ A+ + ++++ ESGAG
Sbjct: 157 IYGEEIIQVYRGAGKSAREMDPHIFAVAEEAHFDMGAFGKSQSIIVSGESGAG 209
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 578 RFPVYXTRCAKLYRGKRRSEVPPXXFAISXGAYVXXXXXXXNPXMLITXESGAGXXXN 751
+ P + + LY+G + E P +A++ Y + ++I+ ESGAG N
Sbjct: 59 QMPYFTEKEMLLYQGAAQYENAPHIYALADNMYRNMLIDNESQCVIISGESGAGKTVN 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,541,679
Number of Sequences: 27780
Number of extensions: 101169
Number of successful extensions: 131
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -