Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_P05
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0007 + 14044844-14045767                                         30   2.1  
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708...    29   4.9  
11_06_0478 + 24073295-24074172,24074790-24075090                       29   6.5  
02_01_0733 - 5477110-5477421,5478146-5478166                           28   8.6  

>10_08_0007 + 14044844-14045767
          Length = 307

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = +3

Query: 438 QFIVSHEGGDKVLQFPFFILSTDYDEYAIAYXCKTLKKKTRTHYVFTWILTRTKNKLQGD 617
           Q IV++ GG+ +  F     +T          C+TL+K+ + + +F W    +++  QG 
Sbjct: 233 QQIVNYPGGNILASFTTAATTTSVPVETALSACRTLQKEGKLYGIFIWAADHSRS--QGF 290

Query: 618 TQKTVETAL 644
             +T   AL
Sbjct: 291 KYETESQAL 299


>03_02_0283 -
           7078754-7078856,7079358-7079431,7079995-7080090,
           7080145-7080270,7080856-7080939,7081458-7081506,
           7081630-7081688,7081908-7081925,7082141-7082620
          Length = 362

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 164 FSERSSRYRVSVQI*SCKRTWIILSFQGVWYN 259
           FS  +S Y +++     ++ WIIL+F   W+N
Sbjct: 274 FSYANSSYSITLSYILSRQFWIILAFSDFWHN 305


>11_06_0478 + 24073295-24074172,24074790-24075090
          Length = 392

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 280 WTANLRLCHPGTSRKTTLATP 342
           W   LR+C+P T R+ TL  P
Sbjct: 80  WGGELRVCNPATRRRATLPPP 100


>02_01_0733 - 5477110-5477421,5478146-5478166
          Length = 110

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 162 RHTKRYRARNNNIVKTSDWYERCRSNGLA 76
           +HTK  R R    V    W+  C  NGLA
Sbjct: 39  KHTKGRRPRRERAVLRYGWHRFCADNGLA 67


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,776,761
Number of Sequences: 37544
Number of extensions: 457840
Number of successful extensions: 927
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)