Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_P04
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135; Eukar... 130 3e-29
UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protei... 120 5e-26
UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole gen... 109 1e-22
UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium ... 109 1e-22
UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 - R... 108 2e-22
UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18; Euka... 107 5e-22
UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53; Eukary... 105 1e-21
UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9; Eukaryo... 105 2e-21
UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep... 103 5e-21
UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5; P... 102 1e-20
UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4; Dikar... 94 5e-18
UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protei... 93 9e-18
UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27; Euka... 93 9e-18
UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1; Encepha... 86 1e-15
UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole gen... 79 1e-13
UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos ... 74 4e-12
UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lambl... 68 3e-10
UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17; n... 67 5e-10
UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C reduc... 67 5e-10
UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;... 67 6e-10
UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;... 62 2e-08
UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillar... 61 4e-08
UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 57 7e-07
UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 56 9e-07
UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2; Desulf... 56 9e-07
UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1; T... 56 1e-06
UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7; Archae... 54 4e-06
UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;... 53 8e-06
UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1; ... 53 8e-06
UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 52 2e-05
UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 50 1e-04
UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2; Thermoprote... 46 0.001
UniRef50_Q6F1Y9 Cluster: 50S ribosomal protein L22; n=2; Firmicu... 46 0.001
UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4; Methan... 44 0.004
UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6; Haloba... 44 0.005
UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aqui... 44 0.007
UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3; Aquifex... 44 0.007
UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4; Archae... 43 0.009
UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6; Thermo... 43 0.009
UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11; Alphap... 41 0.036
UniRef50_Q839F9 Cluster: 50S ribosomal protein L22; n=3; Bacteri... 41 0.036
UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19; Alphap... 40 0.084
UniRef50_A0CDD8 Cluster: Chromosome undetermined scaffold_17, wh... 40 0.11
UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environment... 40 0.11
UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1; Nanoar... 40 0.11
UniRef50_Q9PQQ5 Cluster: 50S ribosomal protein L22; n=2; Ureapla... 37 0.59
UniRef50_Q5L418 Cluster: 50S ribosomal protein L22; n=11; Firmic... 37 0.59
UniRef50_P38511 Cluster: 50S ribosomal protein L22; n=9; Bacteri... 37 0.79
UniRef50_Q2IJ81 Cluster: 50S ribosomal protein L22; n=4; Cystoba... 37 0.79
UniRef50_A6GCH4 Cluster: 50S ribosomal protein L22; n=1; Plesioc... 36 1.0
UniRef50_Q01BQ9 Cluster: 50S ribosomal protein L22-like; n=2; Os... 35 2.4
UniRef50_Q8SX89 Cluster: LD09231p; n=2; Sophophora|Rep: LD09231p... 35 3.2
UniRef50_Q3LVW9 Cluster: Ribosomal protein L17; n=1; Bigelowiell... 34 5.5
UniRef50_A0UKV9 Cluster: Putative uncharacterized protein; n=2; ... 33 9.7
UniRef50_Q2GL54 Cluster: 50S ribosomal protein L22; n=2; Anaplas... 33 9.7
>UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135;
Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens
(Human)
Length = 184
Score = 130 bits (315), Expect = 3e-29
Identities = 57/81 (70%), Positives = 70/81 (86%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 268 RRFNGGVGRCAQAKQFGTTQG 330
RR+NGGVGRCAQAKQ+G TQG
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQG 81
Score = 112 bits (270), Expect = 1e-23
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMS
Sbjct: 82 RWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMS 141
Query: 512 SP 517
SP
Sbjct: 142 SP 143
>UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protein
17, isoform a; n=5; Eukaryota|Rep: Ribosomal protein,
large subunit protein 17, isoform a - Caenorhabditis
elegans
Length = 187
Score = 120 bits (289), Expect = 5e-26
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 276
YSR P+N KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Query: 277 NGGVGRCAQAKQFGTTQG 330
+GG+GR AQ KQ+ TTQG
Sbjct: 66 HGGIGRAAQTKQWNTTQG 83
Score = 104 bits (250), Expect = 3e-21
Identities = 49/62 (79%), Positives = 53/62 (85%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWP KSA+FLL LL+NAESNA+ K LDVD LVI+HI V RA LRRRTYRAHGRINPYMS
Sbjct: 84 RWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMS 143
Query: 512 SP 517
SP
Sbjct: 144 SP 145
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 501 PTCRLPXHIEVCLSEREDAVARVAPTDDA 587
P P HIEV L+E+ED V++ PTDDA
Sbjct: 140 PYMSSPCHIEVILAEKEDVVSK--PTDDA 166
>UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 261
Score = 109 bits (261), Expect = 1e-22
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = +1
Query: 94 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 273
+YSREPDNP KSCKARG +LRVHFKNT ETA AIRK+PL +A RYL++V+ K+ IPF R
Sbjct: 81 KYSREPDNPTKSCKARGLDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPFTR 140
Query: 274 FNGGVGRCAQAK 309
F GVGR AQAK
Sbjct: 141 FCRGVGRTAQAK 152
Score = 100 bits (240), Expect = 4e-20
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWP KSA+++L LL+NAESNAD K LDVD L I HIQVN+A RRRTYRAHGRINPYMS
Sbjct: 161 RWPVKSAKYILDLLKNAESNADLKGLDVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMS 220
Query: 512 SP 517
SP
Sbjct: 221 SP 222
>UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium
yoelii yoelii|Rep: Ribosomal protein L22 - Plasmodium
yoelii yoelii
Length = 249
Score = 109 bits (261), Expect = 1e-22
Identities = 51/81 (62%), Positives = 60/81 (74%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M +Y++E NP K KA +LRVHFKNTYETA AIR+M L A +YL VIEKK C+PF
Sbjct: 1 MVKYAKEIRNPGKCAKAAAVDLRVHFKNTYETARAIRRMNLLEAKKYLNAVIEKKRCVPF 60
Query: 268 RRFNGGVGRCAQAKQFGTTQG 330
RR+NGGVGR QAK+F TQG
Sbjct: 61 RRYNGGVGRTNQAKEFNHTQG 81
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +2
Query: 377 NAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 517
N SN +K LDV +L I HI VNRA RRRT++AHGRINP+MSSP
Sbjct: 148 NNNSNNKSKNLDVGKLKIIHIMVNRARPGRRRTFKAHGRINPFMSSP 194
>UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 -
Rattus norvegicus (Rat)
Length = 220
Score = 108 bits (259), Expect = 2e-22
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V KK+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPF 60
Query: 268 RRFNGGVGRCAQAK 309
RR+NGGV A+ K
Sbjct: 61 RRYNGGVESNAELK 74
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +2
Query: 383 ESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 517
ESNA+ K LD D LVI+HIQVN+AP +RRRTYRAHGRIN YMSSP
Sbjct: 68 ESNAELKGLDGDSLVIEHIQVNKAPKMRRRTYRAHGRINLYMSSP 112
>UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L17-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 176
Score = 107 bits (256), Expect = 5e-22
Identities = 51/74 (68%), Positives = 60/74 (81%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M +YS+EPDN KSCKARG++LRVHFKNT ETA AIRK+PL +A RYL++VI K+ IPF
Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60
Query: 268 RRFNGGVGRCAQAK 309
RF GVGR AQAK
Sbjct: 61 TRFCRGVGRTAQAK 74
Score = 99.5 bits (237), Expect = 1e-19
Identities = 46/62 (74%), Positives = 52/62 (83%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWP KSA+F+L LL+NAESNA+ K LDVD L I HIQVN+A RRRTYRAHGRINPYMS
Sbjct: 83 RWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMS 142
Query: 512 SP 517
+P
Sbjct: 143 NP 144
>UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53;
Eukaryota|Rep: 60S ribosomal protein L17 - Zea mays
(Maize)
Length = 171
Score = 105 bits (252), Expect = 1e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M +YS+EP NP KS KA G +LRVHFKNT ETA A+RK+PL +A RYL++VI K+ IPF
Sbjct: 1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60
Query: 268 RRFNGGVGRCAQAK 309
RR+ GGVGR AQAK
Sbjct: 61 RRYCGGVGRTAQAK 74
Score = 101 bits (242), Expect = 2e-20
Identities = 47/62 (75%), Positives = 51/62 (82%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWP KSA F+L LL+NAESNAD K LDVD L + HIQVN+A RRRTYRAHGRINPYMS
Sbjct: 83 RWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMS 142
Query: 512 SP 517
SP
Sbjct: 143 SP 144
>UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9;
Eukaryota|Rep: 60S ribosomal protein L17 -
Cryptosporidium parvum Iowa II
Length = 187
Score = 105 bits (251), Expect = 2e-21
Identities = 51/96 (53%), Positives = 67/96 (69%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M RY+ PD P+KS +GS+LRV +KNTYETA AI+ M L A +YL +VI KK C+PF
Sbjct: 1 MVRYAVRPDTPSKSVMCKGSDLRVSYKNTYETATAIKGMYLLDARQYLLDVIAKKRCVPF 60
Query: 268 RRFNGGVGRCAQAKQFGTTQGSLAQEIRRIPLAVIE 375
RRFNGGVGR A+A +F TQG ++ R L +++
Sbjct: 61 RRFNGGVGRTAKANEFKLTQGRFPEKSCRFLLDLLQ 96
Score = 79.8 bits (188), Expect = 9e-14
Identities = 38/62 (61%), Positives = 45/62 (72%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
R+P+KS FLL LL+NAESN D K LDVDRL++ V AP RRRT+RAHGRI P+ S
Sbjct: 82 RFPEKSCRFLLDLLQNAESNCDMKGLDVDRLMLVSAVVTHAPFNRRRTFRAHGRITPFKS 141
Query: 512 SP 517
P
Sbjct: 142 QP 143
>UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep:
SJCHGC09296 protein - Schistosoma japonicum (Blood
fluke)
Length = 193
Score = 103 bits (248), Expect = 5e-21
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Frame = +1
Query: 88 MGRYSREP--DNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECI 261
M +YS EP ++ +K+CKAR LR HFKN +E A A++ M L+RA YLKNVIEKKE I
Sbjct: 1 MVKYSWEPKDEDESKTCKARIPYLRTHFKNMHECACAVKGMTLQRAQTYLKNVIEKKEII 60
Query: 262 PFRRFNGGVGRCAQAKQFGTTQG 330
PFRRFNGGVGR AQAK + TTQG
Sbjct: 61 PFRRFNGGVGRHAQAKVWKTTQG 83
Score = 89.8 bits (213), Expect = 8e-17
Identities = 45/65 (69%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNA---DNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
RWPKKSA+ LLQLL NA SN D K + RL I HIQVN+AP +RRRTYRAHGRINP
Sbjct: 84 RWPKKSAQMLLQLLHNAFSNGVYKDIKGGEASRLFIKHIQVNQAPKMRRRTYRAHGRINP 143
Query: 503 YMSSP 517
YM SP
Sbjct: 144 YMCSP 148
>UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5;
Plasmodium|Rep: Ribosomal protein L17, putative -
Plasmodium falciparum (isolate 3D7)
Length = 203
Score = 102 bits (245), Expect = 1e-20
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M +Y+++ N K K G +LRVHFKNTYE A AIR+M L A +YL +VIEKK C+PF
Sbjct: 1 MVKYAKKIRNLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPF 60
Query: 268 RRFNGGVGRCAQAKQFGTTQG 330
R++NGGVGR QAK+F TQG
Sbjct: 61 RKYNGGVGRTNQAKEFNHTQG 81
Score = 84.6 bits (200), Expect = 3e-15
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWP KS +FLL +L N ++NA+++ LDV +L + H+ VN+A RRRTY+AHGRINP+MS
Sbjct: 82 RWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVNKARPGRRRTYKAHGRINPFMS 141
Query: 512 SP 517
SP
Sbjct: 142 SP 143
>UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4;
Dikarya|Rep: 60S ribosomal protein L17-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 187
Score = 93.9 bits (223), Expect = 5e-18
Identities = 45/80 (56%), Positives = 53/80 (66%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M RYS P K KARG+ LR HFKN+ E A I M L++A +L NV E K+ +PF
Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPF 60
Query: 268 RRFNGGVGRCAQAKQFGTTQ 327
RRFNGGVGR AQ K+FG TQ
Sbjct: 61 RRFNGGVGRTAQGKEFGVTQ 80
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWP KS +F LL+NAE+NA+ K LD+D+L+I H+QVN AP RRRTYRAHGR+ Y+S
Sbjct: 82 RWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLS 141
Query: 512 SP 517
SP
Sbjct: 142 SP 143
>UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protein
17, isoform b; n=48; Bilateria|Rep: Ribosomal protein,
large subunit protein 17, isoform b - Caenorhabditis
elegans
Length = 159
Score = 93.1 bits (221), Expect = 9e-18
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 276
YSR P+N KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF
Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
Score = 86.2 bits (204), Expect = 1e-15
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = +2
Query: 362 LQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 517
L LL+NAESNA+ K LDVD LVI+HI V RA LRRRTYRAHGRINPYMSSP
Sbjct: 66 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSP 117
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 501 PTCRLPXHIEVCLSEREDAVARVAPTDDA 587
P P HIEV L+E+ED V++ PTDDA
Sbjct: 112 PYMSSPCHIEVILAEKEDVVSK--PTDDA 138
>UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27;
Eukaryota|Rep: 60S ribosomal protein L17-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 184
Score = 93.1 bits (221), Expect = 9e-18
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M RY NPAKS ARGS LRV FKNT ETA AI L +A +YL+ V++ + IPF
Sbjct: 1 MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPF 60
Query: 268 RRFNGGVGRCAQAKQFGTTQ 327
RRFN +GR AQ K+FG T+
Sbjct: 61 RRFNSSIGRTAQGKEFGVTK 80
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 326 RXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPY 505
+ RWP KS +F+ LL+NA +NA+ K LD +L + HIQVN+AP RRRTYRAHGRIN Y
Sbjct: 80 KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKY 139
Query: 506 MSSP 517
SSP
Sbjct: 140 ESSP 143
>UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L17
- Encephalitozoon cuniculi
Length = 183
Score = 86.2 bits (204), Expect = 1e-15
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = +2
Query: 320 QHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRIN 499
Q R RWPKKSAEFL+ +L N + NA+ K LD LVI H+QV++AP + RT+RAHGR+N
Sbjct: 99 QTRGRWPKKSAEFLISVLENIKENAETKGLDPKDLVITHVQVSKAPKIFGRTFRAHGRVN 158
Query: 500 PYMSSP 517
P+ SP
Sbjct: 159 PFNKSP 164
Score = 77.0 bits (181), Expect = 6e-13
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 94 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 273
+YS E +P+K+ KA+ N +V FK T E + +R+ + A++YLKNVI K EC+PFRR
Sbjct: 4 KYSYEIHDPSKAVKAKIDNAKVSFKKTREASCTLRRRKVLDAIQYLKNVIAKTECVPFRR 63
Query: 274 FNGGVGRCAQAKQF 315
+N G G+ QA++F
Sbjct: 64 YNRGCGQTHQARKF 77
>UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 330
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/74 (52%), Positives = 48/74 (64%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M +YSRE DNP K CK R S+ RVHFKNT ET A ++ L A YL++ ++ +PF
Sbjct: 1 MVKYSRESDNPTKFCKTRDSDFRVHFKNTRETTDATSRLLLTMAREYLEDAPVHEQAMPF 60
Query: 268 RRFNGGVGRCAQAK 309
RF GVGR AQAK
Sbjct: 61 TRFCRGVGRTAQAK 74
Score = 41.9 bits (94), Expect = 0.021
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 344 KSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPXP 523
KS +++L LL++AESNAD K LDV+ I HIQ R Y +H + + +
Sbjct: 87 KSVKYILVLLKHAESNADLKGLDVNSPYISHIQPCTGGFHFRSLYLSHSSSSLFPTPDQN 146
Query: 524 HR 529
HR
Sbjct: 147 HR 148
>UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos
taurus (Bovine)
Length = 86
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +2
Query: 401 KTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 517
K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSP
Sbjct: 1 KGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSP 39
>UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_28895_29389 - Giardia lamblia
ATCC 50803
Length = 164
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 88 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 267
M +Y+ + DN K+R ++ FKNTY T AI+ M ++RA YL NV+ KE +PF
Sbjct: 1 MVKYAFKSDNLLVG-KSRRDGVKASFKNTYSTCRAIKGMGVKRAFAYLDNVLNHKEIVPF 59
Query: 268 RRFNGGVGRCAQAKQFGTTQG 330
+F GVGR +QA+ GT +G
Sbjct: 60 FKFYKGVGRHSQARGSGTDKG 80
Score = 54.8 bits (126), Expect = 3e-06
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +2
Query: 326 RXRWPKKSAEFLLQLLRNAESNADNK-TLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
+ RWP+KS + +L+ A SNA + + D L + VNRA RRRT+RAHGRI+
Sbjct: 79 KGRWPEKSVVVVKDILKQAVSNAKHAHKKEEDELYVISYCVNRARGRRRRTFRAHGRISK 138
Query: 503 YMSSP 517
Y S P
Sbjct: 139 YESQP 143
>UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17;
n=11; Eutheria|Rep: Similar to 60S ribosomal protein L17
- Homo sapiens (Human)
Length = 102
Score = 67.3 bits (157), Expect = 5e-10
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +2
Query: 380 AESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 517
AESNA+ K LDVD LVI+HIQVN+AP +RRR RA+GRI P MSSP
Sbjct: 19 AESNAELKGLDVDSLVIEHIQVNKAPKMRRRIDRAYGRIYPCMSSP 64
>UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C
reductase iron-sulfur subunit, mitochondrial; n=1; Homo
sapiens|Rep: Similar to Ubiquinol-cytochrome C reductase
iron-sulfur subunit, mitochondrial - Homo sapiens
(Human)
Length = 282
Score = 67.3 bits (157), Expect = 5e-10
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +2
Query: 380 AESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 517
AESNA+ K LDVD LVI+HIQVN+AP +RRR RA+GRI P MSSP
Sbjct: 19 AESNAELKGLDVDSLVIEHIQVNKAPKMRRRIDRAYGRIYPCMSSP 64
>UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;
Homo sapiens|Rep: CDNA FLJ27083 fis, clone SPL03425 -
Homo sapiens (Human)
Length = 136
Score = 66.9 bits (156), Expect = 6e-10
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +2
Query: 302 KQSSLAQHRXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYR 481
+ S A++R PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYR
Sbjct: 9 RPDSGARYRVAGPKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYR 67
Query: 482 AHGRINPYMSS 514
AHG+INPY++S
Sbjct: 68 AHGQINPYVTS 78
>UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 191
Score = 62.1 bits (144), Expect = 2e-08
Identities = 38/74 (51%), Positives = 43/74 (58%)
Frame = +1
Query: 109 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 288
P+N KSCK+R SNL VHFKNT ET +LK V PF +NGGV
Sbjct: 19 PENLTKSCKSRSSNLHVHFKNTRETV-------------FLKRV-------PFCYYNGGV 58
Query: 289 GRCAQAKQFGTTQG 330
GRCAQAKQ G T+G
Sbjct: 59 GRCAQAKQQGWTRG 72
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2
Query: 326 RXRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVID 433
R WPK+SAEFLL L+NAE NA+ K LD D LV++
Sbjct: 71 RGWWPKQSAEFLLHELKNAEGNAELKGLDTDSLVLN 106
>UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillardia
theta|Rep: 60S ribosomal protein L17 - Guillardia theta
(Cryptomonas phi)
Length = 153
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
RWPKKSA+ +L L++N S + + I +I +N+A RRRT+RAHGR+N + S
Sbjct: 75 RWPKKSAKIILSLIKNLNSIVSKNKSEDNPFYIKNININQAVRGRRRTFRAHGRVNSFES 134
Query: 512 SP 517
+P
Sbjct: 135 NP 136
Score = 59.7 bits (138), Expect = 1e-07
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +1
Query: 148 NLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQ 327
N +VH KNT E I M L RA +LKNVI KKE +PF+ + G+GR +Q Q
Sbjct: 14 NQKVHLKNTREVGCCIIGMTLGRAENFLKNVILKKEIVPFKVYRYGIGRKSQVNQSKNIS 73
Query: 328 GSLAQEIRRIPLAVIE 375
G ++ +I L++I+
Sbjct: 74 GRWPKKSAKIILSLIK 89
>UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Archaeoglobus fulgidus
Length = 155
Score = 56.8 bits (131), Expect = 7e-07
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
R+P+K+A+++L++LRN E+NA+ K LDV+ LVI H Q + + R RA GR P
Sbjct: 84 RYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVIERYMPRAFGRATP 140
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 273
Y+ +P++ K+ KA G + + FK+ E AIR + A + L++V+E K IPF+R
Sbjct: 8 YAYKPEDETKAAKAMGYEMPISFKHAVEICRAIRGKKIEEARKLLEDVVEMKRAIPFKR 66
>UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L22P -
Sulfolobus solfataricus
Length = 157
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
R+PKK+ +L++L NAE+NA NK LDVD+L+I HI ++ L+R RA GR
Sbjct: 85 RYPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGR 138
Score = 37.9 bits (84), Expect = 0.34
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +1
Query: 94 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 273
+Y + + K KA ++ ++ Y AIR M L A +L V+E+KE +PF R
Sbjct: 5 KYPQLDVDELKIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWR 64
Query: 274 FNGG 285
+N G
Sbjct: 65 YNKG 68
>UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L22P -
Aeropyrum pernix
Length = 156
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
R+P K+A ++L+LL N E+NA NK LDV+RL I H+ ++ L+R RA GR P
Sbjct: 85 RYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATP 141
Score = 46.8 bits (106), Expect = 7e-04
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 276
YS + + ++ KA N+ VH K E A AI M + A RYL+ VIEK+E +PFRR
Sbjct: 6 YSVKLRDESEVAKAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRA 65
Query: 277 NG-GVGRCAQAKQFGTTQGSLAQEIRRIPLAVIE 375
+G R A ++G G + R L +++
Sbjct: 66 HGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLD 99
>UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L22,
putative - Trichomonas vaginalis G3
Length = 164
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKT-LDVDRLVIDHIQVNRAPCLR-RRTYRAHGRINPY 505
RWP K AE ++L++ A + A K ++VD +++ H+Q NRA R RR ++AHGR+ Y
Sbjct: 83 RWPVKCAELYIKLIKTALAGAPQKPGVNVDEVLVAHVQCNRATQYRWRRIHQAHGRVKSY 142
Query: 506 MSSP 517
S P
Sbjct: 143 ASPP 146
Score = 53.2 bits (122), Expect = 8e-06
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 121 AKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCA 300
+K+ KA RVHFK ET I+ M + A+ YL+ V+ K+ +PF R+ GG+ A
Sbjct: 13 SKALKASTGLERVHFKPMMETGRVIKGMKAQDAIAYLEAVMRKERAVPFFRYKGGISHHA 72
Query: 301 QAKQFG 318
Q ++G
Sbjct: 73 QGHEWG 78
>UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7;
Archaea|Rep: 50S ribosomal protein L22P - Methanopyrus
kandleri
Length = 159
Score = 54.4 bits (125), Expect = 4e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMS 511
R+P+K+A +L++L +AE+NA+ K LD DRL I HI ++ +R RA GR P+ +
Sbjct: 88 RFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATPF-N 146
Query: 512 SPXPH 526
+P H
Sbjct: 147 TPTTH 151
Score = 48.4 bits (110), Expect = 2e-04
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +1
Query: 97 YSREPD--NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFR 270
YS P+ + ++ KA LR+ K+ E AIR MPL RA +L+ VI K+E +PFR
Sbjct: 9 YSIPPEELDDERTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFR 68
Query: 271 RFNGGVGRCAQAKQFGTTQGSLAQEIRRIPLAVIE 375
+ V Q + G G ++ R L V+E
Sbjct: 69 KHKKKVPHRRQIRP-GWDAGRFPEKAAREILRVLE 102
>UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 405
Score = 53.2 bits (122), Expect = 8e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 118 PAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 294
P KSCK+ GSNL VHFKN +E + I + + LK V K + + F+ +NGGV R
Sbjct: 76 PHKSCKSWGSNLCVHFKNIWEISQVIEGTDICKFTESLKGVTLKNQYMLFQLYNGGVNR 134
>UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 467
Score = 53.2 bits (122), Expect = 8e-06
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +1
Query: 100 SREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFN 279
S E DNP K C S+ RVHFKNT T A + L A YL++ + +++ +PF RF
Sbjct: 275 SGESDNPTKFCNTGDSDSRVHFKNTRVTTRATSMLLLTMARGYLEDALVREQTMPFTRFC 334
Query: 280 GGV 288
G+
Sbjct: 335 RGI 337
>UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5;
Thermoplasmatales|Rep: 50S ribosomal protein L22P -
Thermoplasma acidophilum
Length = 151
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
R+P K+A+ QLL N E+NA+ K L+ D LVI HI N+ +++ T +A+GR
Sbjct: 78 RYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGR 131
Score = 34.7 bits (76), Expect = 3.2
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 82 IIMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECI 261
IIM YS E + KAR + K++ A +R MPL RA + VI K I
Sbjct: 2 IIMKGYSMEIEG--NHAKARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAI 59
Query: 262 PFRRF 276
P+ R+
Sbjct: 60 PYFRY 64
>UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Pyrococcus abyssi
Length = 155
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPY 505
R+P K A+ + ++L NA++NA K LD D+L I HI +R P LR RA GR P+
Sbjct: 82 RYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPF 139
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 88 MGR---YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKEC 258
MGR YS + +P + +A G +LR+ K E +R M L A+RYL +VI +
Sbjct: 1 MGRRFDYSFQNFDPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRP 60
Query: 259 IPFRRFNGGVGRCAQAKQFG 318
+P +R+N G K FG
Sbjct: 61 VPLKRYNDSQGH-KPGKGFG 79
>UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2;
Thermoprotei|Rep: Ribosomal protein L22 - Cenarchaeum
symbiosum
Length = 152
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 276
YS E +P + +A ++ K+ E ++ IR M + +A +L+ VIEKK +PFRRF
Sbjct: 6 YSFEGYDPTRHVRASLREKQISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRF 65
Query: 277 NGGVG 291
VG
Sbjct: 66 KRQVG 70
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
R+P+KSA ++LL N ESNA+ K +D+DRL I ++ ++R RA GR P
Sbjct: 81 RYPEKSAAEFIKLLDNLESNAEYKGMDLDRLTIVGAVAHKGILIKRFIPRAMGRSTP 137
>UniRef50_Q6F1Y9 Cluster: 50S ribosomal protein L22; n=2;
Firmicutes|Rep: 50S ribosomal protein L22 - Mesoplasma
florum (Acholeplasma florum)
Length = 112
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +2
Query: 341 KKSAEFLLQLLRNAESNA-DNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
K+SAE +L+LL +A +NA +N +D D+L + I VN P L+R RAHGR
Sbjct: 41 KRSAEPVLKLLNSAIANAVNNNGMDADKLFVKTIFVNEGPTLKRFRPRAHGR 92
>UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4;
Methanomicrobiales|Rep: 50S ribosomal protein L22P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 154
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTY--RAHGRINP 502
R+P+K++ L+LL N NA+ L+ D+L I H+ NR +RRR++ RA GR P
Sbjct: 81 RYPQKASRVYLRLLNNVRKNAEYNGLEGDQLRIVHVSANRG--IRRRSFMPRAMGRATP 137
Score = 36.3 bits (80), Expect = 1.0
Identities = 29/105 (27%), Positives = 47/105 (44%)
Frame = +1
Query: 166 KNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGSLAQE 345
K+ E A IR M L A YL+ V+ ++ IPF+RFN V + G G Q+
Sbjct: 28 KHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNVPH--RKGLVGWDAGRYPQK 85
Query: 346 IRRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIP 480
R+ L ++ K + N G H +R + ++++P
Sbjct: 86 ASRVYLRLLNNV-RKNAEYNGLEGDQLRIVHVSANRGIRRRSFMP 129
>UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L22P -
Halobacterium salinarium (Halobacterium halobium)
Length = 156
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
R+P+K+++ L+LL N +NAD + D D +VI+H+ ++ + R RA GR
Sbjct: 80 RYPEKASKDFLKLLSNVSNNADQQGFDADEMVIEHVAPHKVGESQGRKPRAMGR 133
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 276
YS + D+ A S KA + K++ A I + A YL+ VI+++ +PF++
Sbjct: 5 YSVDVDSEA-SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQH 63
Query: 277 NGGVG 291
N GVG
Sbjct: 64 NSGVG 68
>UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aquifex
aeolicus VF5|Rep: ribosomal protein L22 - Aquifex
aeolicus VF5
Length = 98
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
PKK+A ++L++ +NA+ K LD+DRL I + P L++ RAHGR
Sbjct: 22 PKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGR 73
>UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3;
Aquifex|Rep: 50S ribosomal protein L22 - Aquifex
aeolicus
Length = 133
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
PKK+A ++L++ +NA+ K LD+DRL I + P L++ RAHGR
Sbjct: 57 PKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGR 108
>UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4;
Archaea|Rep: 50S ribosomal protein L22P - Uncultured
methanogenic archaeon RC-I
Length = 153
Score = 43.2 bits (97), Expect = 0.009
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +1
Query: 97 YSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 276
Y+ E D PA + KA + V K+ E IR M L A YL++VI+KK +PF++
Sbjct: 6 YTAEFD-PATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQH 64
Query: 277 NGGVG 291
VG
Sbjct: 65 ARNVG 69
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
R+P K++ +L+LL++AE+NA+ K L+ + + I H + ++ RA GR
Sbjct: 81 RYPVKASTEILKLLKHAEANAEYKGLETENMRIIHSTSKKGRVIQGIMPRAMGR 134
>UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L22P -
Pyrobaculum aerophilum
Length = 168
Score = 43.2 bits (97), Expect = 0.009
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +2
Query: 332 RWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
+WP K A LQ+L N E+NA + LDVDR+VI H ++ + RA GR
Sbjct: 81 KWPVKVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHKGFKIPNIMPRAFGR 134
>UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia typhi
Length = 119
Score = 41.1 bits (92), Expect = 0.036
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNKT-LDVDRLVIDHIQVNRAPCLRRRTYRAHG---RINPY 505
PK+ A+ + LR+A +NA+N LD+DRL+I V ++ ++R RA G RIN +
Sbjct: 46 PKRIAKIVKDCLRSAVANAENNLGLDIDRLIITKATVGKSVVMKRIMPRAKGRATRINKF 105
Query: 506 MSS 514
S+
Sbjct: 106 FSN 108
>UniRef50_Q839F9 Cluster: 50S ribosomal protein L22; n=3;
Bacteria|Rep: 50S ribosomal protein L22 - Enterococcus
faecalis (Streptococcus faecalis)
Length = 115
Score = 41.1 bits (92), Expect = 0.036
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNK-TLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
P KSA + ++L +A +NA+N LDV+ LV+ VN P ++R RA G +P
Sbjct: 45 PNKSAGIIEKVLMSAVANAENNFDLDVESLVVSEAFVNEGPTMKRFRPRAKGSASP 100
>UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia conorii
Length = 119
Score = 39.9 bits (89), Expect = 0.084
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNKT-LDVDRLVIDHIQVNRAPCLRRRTYRAHG---RINPY 505
PK+ A+ + L++A +NA+N LD+DRLV+ V +A ++R RA G RIN +
Sbjct: 46 PKRIAKVVKDCLQSAVANAENNLGLDIDRLVVTKATVGKALVMKRVMPRAKGRATRINKF 105
Query: 506 MSS 514
S+
Sbjct: 106 FSN 108
>UniRef50_A0CDD8 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 341
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 341 KKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 502
+K+A+FL + L S+A + D +RL + IQV R R+ + A RINP
Sbjct: 157 RKAAQFLAKTLVMVRSHAVQRGYDPERLYVQSIQVGRYKKFRKARFHAKARINP 210
>UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environmental
samples|Rep: Ribosomal protein L22 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 175
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 136 ARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 273
AR N +H K+ Y+ A A++ M AV YL+ V++++ IP++R
Sbjct: 24 ARAVNRDIHHKHCYQIARAVKGMYAGDAVEYLEKVVKQEVAIPYKR 69
>UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L22P -
Nanoarchaeum equitans
Length = 174
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 94 RYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 273
RYS +N AK NL + K+ E A IR +PL+ A L+ V++K+ +PF R
Sbjct: 2 RYSVSLENVAK---LYAHNLPISTKHAVEIAKMIRYLPLQLAKEMLQKVLDKELAVPFFR 58
Query: 274 FN 279
+N
Sbjct: 59 YN 60
>UniRef50_Q9PQQ5 Cluster: 50S ribosomal protein L22; n=2; Ureaplasma
parvum|Rep: 50S ribosomal protein L22 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 253
Score = 37.1 bits (82), Expect = 0.59
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNKTLDVD--RLVIDHIQVNRAPCLRRRTYRAHG 490
PKK A +L+LL +A SN + + D+D +L I I N+ P ++R RA G
Sbjct: 40 PKKFAPIVLKLLNSAISNVQHNSKDMDPSKLYIYKIVANQGPTMKRTLPRAKG 92
>UniRef50_Q5L418 Cluster: 50S ribosomal protein L22; n=11;
Firmicutes|Rep: 50S ribosomal protein L22 - Geobacillus
kaustophilus
Length = 113
Score = 37.1 bits (82), Expect = 0.59
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
PK ++ + ++L++A +NA+ N +DV+ LVI V+ P L+R RA GR
Sbjct: 40 PKAASPIIEKVLKSAVANAEHNYDMDVNNLVITQAYVDEGPTLKRFRPRAMGR 92
>UniRef50_P38511 Cluster: 50S ribosomal protein L22; n=9;
Bacteria|Rep: 50S ribosomal protein L22 - Thermotoga
maritima
Length = 159
Score = 36.7 bits (81), Expect = 0.79
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNK-TLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
PKK+A + ++L++A +NA+N L V+ L + VN P ++R R GR
Sbjct: 68 PKKAARIMEKVLKSAVANAENNFGLSVENLYVSECYVNDGPRMKRIWPRGRGR 120
>UniRef50_Q2IJ81 Cluster: 50S ribosomal protein L22; n=4;
Cystobacterineae|Rep: 50S ribosomal protein L22 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 146
Score = 36.7 bits (81), Expect = 0.79
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNADNK--TLDVDRLVIDHIQVNRAPCLRRRTYRAHGR 493
P+ +A+ L +LLR+A +NA+ +DVD L + + V++ P +RR RA GR
Sbjct: 72 PQSAAKPLAKLLRSAVANAEQGGGRVDVDALFVKTLTVDQGPKMRRFMARAMGR 125
>UniRef50_A6GCH4 Cluster: 50S ribosomal protein L22; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L22 - Plesiocystis pacifica SIR-1
Length = 113
Score = 36.3 bits (80), Expect = 1.0
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 302 KQSSLAQHRXRWPKKSA--EFLLQLLRNAESNADNK-TLDVDRLVIDHIQVNRAPCLRRR 472
K S A + R+ KS EF +L+ +A +NA+++ DVD LVI + V++ P L+R
Sbjct: 26 KDVSSAINSLRFMNKSGSREFF-KLIVSAVANAEDQGNADVDNLVITRVTVDQGPTLKRW 84
Query: 473 TYRAHGR 493
RA GR
Sbjct: 85 RPRAQGR 91
>UniRef50_Q01BQ9 Cluster: 50S ribosomal protein L22-like; n=2;
Ostreococcus|Rep: 50S ribosomal protein L22-like -
Ostreococcus tauri
Length = 109
Score = 35.1 bits (77), Expect = 2.4
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 338 PKKSAEFLLQLLRNAESNA-DNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSS 514
PK+ A+ + +++++A NA +N+ LD DRLVI V + LRR + GR M
Sbjct: 3 PKRVAKTVGKVIQSAVGNAVNNQGLDRDRLVIAWATVGKGQYLRRVSMHGRGRAG-VMHR 61
Query: 515 PXPH 526
P H
Sbjct: 62 PRTH 65
>UniRef50_Q8SX89 Cluster: LD09231p; n=2; Sophophora|Rep: LD09231p -
Drosophila melanogaster (Fruit fly)
Length = 570
Score = 34.7 bits (76), Expect = 3.2
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 316 GTTQGSLAQEIRRIPLAVIEER*IKR*QQNFGRGQASHRPHSGKSRALPTQTYIPCSRSH 495
GTT G+ RR+PL++ + R QQ+ G S+ P +G + T++++P +S+
Sbjct: 14 GTTSGTGTG--RRLPLSLSGGSTVTRLQQSSGSNGRSNSPQNGNKKI--TESFLPVKKSN 69
Query: 496 QP 501
QP
Sbjct: 70 QP 71
>UniRef50_Q3LVW9 Cluster: Ribosomal protein L17; n=1; Bigelowiella
natans|Rep: Ribosomal protein L17 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 152
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 344 KSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRIN 499
K+ + ++ L+N N ++ + +D ID I +NR R+ YRA+GR N
Sbjct: 84 KAIKNMINELKNCLHNKIDERVVLDAYYIDSIIINRGKKYLRKIYRAYGRAN 135
>UniRef50_A0UKV9 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 760
Score = 33.1 bits (72), Expect = 9.7
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 449 RAPCLRRRTYRAHGRINPYMSSPXPHRSMSQRTRRCCR 562
R+ CLR R R G P+ SP RS + RRCCR
Sbjct: 672 RSACLRDR--RRRGTAAPHRRSPARARSTRRSVRRCCR 707
>UniRef50_Q2GL54 Cluster: 50S ribosomal protein L22; n=2;
Anaplasma|Rep: 50S ribosomal protein L22 - Anaplasma
phagocytophilum (strain HZ)
Length = 112
Score = 33.1 bits (72), Expect = 9.7
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 302 KQSSLAQHRXRWPKKSAEFLL-QLLRNAESNAD-NKTLDVDRLVIDHIQVNRAPCLRRRT 475
K ++A ++ KK A L+ ++L++A +NA N +D D L + + V +A LRR
Sbjct: 29 KDVAVAAMYLKFCKKKAALLIDKVLKSAIANARANYGVDADNLYVKEVLVGKAFTLRRVQ 88
Query: 476 YRAHGR 493
RA GR
Sbjct: 89 PRARGR 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,007,700
Number of Sequences: 1657284
Number of extensions: 11814216
Number of successful extensions: 27819
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 26922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27808
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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