Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_P03
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    31   0.92 
06_02_0019 - 10656005-10657511,10657712-10658739                       29   3.7  

>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +2

Query: 473 CLFCACASQSRSILVCLLHRCYPAP 547
           CLFC     SR ILVC L RC  AP
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAP 82


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/32 (31%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = -1

Query: 619 STSIXINIVGX-TSYGAGTTKPWQSGRWITAM 527
           +T+I ++++G   +YGAG+++ W++  ++ AM
Sbjct: 750 NTTIVLDMIGLLVAYGAGSSREWETSGYVIAM 781


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,209,781
Number of Sequences: 37544
Number of extensions: 202469
Number of successful extensions: 327
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)