Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_O23
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 34 0.14
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.24
12_02_0299 - 17051570-17052474,17053542-17053755 31 0.96
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.2
12_02_1174 - 26696869-26698191 29 5.1
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.1
03_06_0297 - 32924162-32924605 28 8.9
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 34.3 bits (75), Expect = 0.14
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = -2
Query: 416 PP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
PP V PP P P PV LP +K+ PP P P P K+ PPP
Sbjct: 1138 PPVPVSSPPPPEKSPPPPAPVILPPPPIKS----PP-PPAPVISPPPPVKSPPPP 1187
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -2
Query: 446 LAXSXAQSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPL---PKXPXXXXPK 276
L+ +S PP V PP P P PVSLP +K+ P+ P P
Sbjct: 1256 LSPPAVKSLPPPAPVSLPPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPP 1315
Query: 275 XPKTXPPP 252
P + PPP
Sbjct: 1316 APVSLPPP 1323
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
+S PP V PP P P PV LP +K+ PP P P P K+ PPP
Sbjct: 1166 KSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKS----PP-PPAPVISPPPPVKSPPPP 1219
Score = 32.3 bits (70), Expect = 0.55
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPP--LPKXP-XXXXPKXPKTXP 258
+S PP V PP P P A PV L +K+ P LP P P P + P
Sbjct: 1230 KSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPPPVKSLPPPAPVSLP 1289
Query: 257 PP 252
PP
Sbjct: 1290 PP 1291
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
+S PP V PP P P PV P +K+ PP P P P K+ PPP
Sbjct: 1150 KSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKS----PP-PPAPVILPPPPVKSPPPP 1203
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
+S PP V PP P P PV P +K+ PP P P P K+ PPP
Sbjct: 1182 KSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKS----PP-PPAPVILPPPPVKSPPPP 1235
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/58 (36%), Positives = 25/58 (43%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPP 255
+S PP V PP P P PV LP +K+ PP P P P K+ PP
Sbjct: 1198 KSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKS----PP-PPAPVISPPPPEKSPPP 1250
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
+S PP V PP P P PV P K+ PP P P P K+ PPP
Sbjct: 1214 KSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKS----PP-PAAPVILSPPAVKSLPPP 1267
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/59 (35%), Positives = 23/59 (38%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
+S PP V PP P PVSLP +K P P P P K PPP
Sbjct: 1278 KSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVK-----PLPPPAPVSLPPPAVKPLPPP 1331
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 428 QSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
+S PP V PP P PVSLP +K PP+P+ P ++ PPP
Sbjct: 1294 KSLPPPAPVSLPPPAVKPLPPPAPVSLPPPAVK--PLPPPVPQ--VSLPPPKQESLPPP 1348
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.5 bits (73), Expect = 0.24
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Frame = -2
Query: 446 LAXSXAQSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXP----XXXXP 279
L S S +PP PP PN P P P L N PP P P P
Sbjct: 575 LPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLP 634
Query: 278 KXPKTXPPP 252
P PPP
Sbjct: 635 PPPPPPPPP 643
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.5 bits (68), Expect = 0.96
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 416 PP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPP 252
PP + PP P P A P P+ L PPLP P P PPP
Sbjct: 281 PP--IFSPPSPPPPPPPAFPFPFPQ--LPPLPHFPPLPSFYPSPPPPPPPPPPPP 331
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -2
Query: 446 LAXSXAQSRRPP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPK 267
L+ Q+ PP P P P A + P K+ PP P P P K
Sbjct: 567 LSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRP--PPPAMPGSSK 624
Query: 266 TXPPP 252
T PPP
Sbjct: 625 TRPPP 629
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = -2
Query: 416 PP*XVXXPPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPK--XPKTXPPP 252
PP P P+ P P P L+ PP P P P PK PPP
Sbjct: 158 PPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPP 214
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = -2
Query: 452 QXLAXSXAQSRRPP*XVXXPPGPNTXXP*AXP---VSLPRXXLKNXXXXPPLPKXPXXXX 282
Q +A + S PP PP P P P + P K PP P
Sbjct: 301 QSIAAAAVASPAPP--PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358
Query: 281 PKXPKTXPPP 252
PK P PPP
Sbjct: 359 PKGPSPPPPP 368
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = -2
Query: 395 PPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXP---KTXPPP 252
PP P P P P PP PK P P P K PPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>03_06_0297 - 32924162-32924605
Length = 147
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = -2
Query: 395 PPGPNTXXP*AXPVSLPRXXLKNXXXXPPLPKXPXXXXPKXPKTXPPPXXXXQXT 231
PPG T P S+P + P P P P+ PPP + T
Sbjct: 82 PPGAPTPGPEQPGPSIPSPPMPEVPDVPRNPDVPPPKPPELDPPRPPPEVVPEPT 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,194,590
Number of Sequences: 37544
Number of extensions: 152758
Number of successful extensions: 478
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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