Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_O22
(906 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580... 33 0.41
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 32 0.72
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 31 0.95
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 31 1.7
01_01_0401 + 3043634-3043894,3045610-3045849 31 1.7
03_05_0373 + 23581812-23583293 30 2.2
05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824 30 2.9
03_02_0161 + 6046949-6047063,6048759-6048844,6049029-6049094,604... 30 2.9
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 3.8
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 29 6.7
04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414... 28 8.9
02_03_0077 + 14874273-14874571,14875304-14876150,14876878-148771... 28 8.9
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 28 8.9
>07_03_1615 -
28157237-28157472,28157649-28157728,28157853-28158009,
28158379-28158565,28158646-28158772,28159218-28159805,
28159898-28160443,28161579-28161620,28162081-28162145,
28162273-28162377,28162682-28162741,28163149-28163237,
28163611-28163732,28163862-28163968,28164041-28164111,
28164377-28164470,28165010-28165247,28166112-28166347
Length = 1049
Score = 32.7 bits (71), Expect = 0.41
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 458 LDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPK---IKAAYDDFAKN 628
LD + A L + +QES++ +K++ Q+ E+L + I+ A+DD KN
Sbjct: 763 LDGQAKAMEGLNHLYSFQAQALQESRETIQKLAQFGQQQQEELLSRQEQIRHAHDDLMKN 822
Query: 629 TQEVIKKIQEAANAKQ*ASI 688
++ ++ + QE AKQ ASI
Sbjct: 823 SESIL-EAQEEFRAKQ-ASI 840
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 433 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 275
P R SA T+ WP L A+ +R L AL+CC + S PS L++C S
Sbjct: 99 PGLRASAPTLR---WPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 DVEK--NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQ 634
D EK + TA E+L+A +Q T +++ + AKK + + NE+L K + A + + Q
Sbjct: 958 DTEKINSLTAEVEQLKALLQ-TERQATETAKKEYAEAERRNEELIKKFEGA-EKKIEQLQ 1015
Query: 635 EVIKKIQEAA 664
+ +++++E A
Sbjct: 1016 DTVQRLEEKA 1025
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 491 EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQE 637
EKLQ + + QE+Q+L KK+SS V E +++ ++ + + A+ E
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQQEAE 200
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = -3
Query: 484 GGGVLLDVQGGPCGAPRPCARCSASTVP----KP---PWPCRSRLRALPWRLLAKALSCC 326
GGG + P +P A+C A VP +P P P R + L + C
Sbjct: 23 GGGGGKKLHQSPPPSPPEAAKCCADGVPVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFC 82
Query: 325 STDSEPSFQALLKSC 281
S+D E SF+A K C
Sbjct: 83 SSDVEGSFEAFTKQC 97
>03_05_0373 + 23581812-23583293
Length = 493
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 466 DVQGGPCGAPRPCARCSASTVPKPPW 389
D GG A +RCSAST PK PW
Sbjct: 53 DGAGGYGSAASSPSRCSASTPPKSPW 78
>05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824
Length = 200
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 482 ALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEA 661
A +EK QAA + + +Q K SS Q +K A + T++ +K E
Sbjct: 58 ATKEKAQAAKERASETAQAAKDKTSSTSQAARDKAAESKDQTGGFLGEKTEQAKQKAAET 117
Query: 662 ANA 670
A A
Sbjct: 118 AGA 120
>03_02_0161 +
6046949-6047063,6048759-6048844,6049029-6049094,
6049408-6049860,6049960-6050115,6050319-6050465,
6050570-6050641,6050730-6051293
Length = 552
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 488 REKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAAN 667
R LQ +Q +++ +A+K + + N+KL K+KA DD + ++ A
Sbjct: 337 RRLLQGEIQR-LRDKIAMAEKSAKAEAQLNDKLRRKLKALEDDMRNESSNTSASNKDNAT 395
Query: 668 AKQ 676
+KQ
Sbjct: 396 SKQ 398
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +2
Query: 461 DVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 640
D+EKN + REK+Q + Q T++E + + K + + E L +K+ D F + ++
Sbjct: 342 DLEKNLASEREKIQHSSQ-TLKEMESVYNKHA----KRQEDLENNMKSCKDQFKEFERKD 396
Query: 641 IKKIQEAANAKQ 676
+K ++ + KQ
Sbjct: 397 VKYREDLKHLKQ 408
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 467 EKNATALR-EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKA---AYDDFAKNTQ 634
EKNA L+ ++L+A ++N E ++ +VS+ +++ NE+L KI + ++ Q
Sbjct: 832 EKNAALLQVQQLEANLKNLESELEQKQSQVSA-LEQANEELREKISSLERQLEEARSKLQ 890
Query: 635 EVIKKIQ 655
+ I K+Q
Sbjct: 891 DEIIKLQ 897
>04_04_0285 -
24136865-24137000,24137554-24137611,24138142-24141480,
24141789-24142218,24142861-24142928,24143015-24143165
Length = 1393
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 464 VEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDD 616
+EK++ ++ E+ Q+ + Q+ +K AKKVSS E+ + K + Y +
Sbjct: 516 LEKSSKSILEETQSVGHTSQQKKRKKAKKVSSVDMESLDISGEKDQCGYGE 566
>02_03_0077 +
14874273-14874571,14875304-14876150,14876878-14877147,
14877313-14878065
Length = 722
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 503 AAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 652
A TVQ + L +K+ SN+ + E+L + K + D+ + EVI+KI
Sbjct: 69 AFFSKTVQGAVDLIEKMVSNMGWSKERLQTRQKPSVDEQFAHFVEVIQKI 118
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 451 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSC 329
PC P P R ++T + PW R R + W L C
Sbjct: 26 PCTTPAPRMRSLSATTTRRPWRTGWRGRPMRWASLVVMKLC 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,817,777
Number of Sequences: 37544
Number of extensions: 310715
Number of successful extensions: 1468
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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