Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_O21
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.023
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.031
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.12
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.12
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.12
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.66
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 2.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 3.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.5
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 8.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.2
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -2
Query: 649 GGEGDXXGVRXXXAXGEGXGGGXSXWXQGXGTXGGGGXXLXVDXXGXGGGGXGEGXGXRX 470
GG G G G GGG + G G GGG G GGG G G G
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Query: 469 XGG 461
GG
Sbjct: 268 HGG 270
Score = 33.1 bits (72), Expect = 0.054
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -2
Query: 604 GEGXGGGXSXWXQGXGTXGGGGXXLXVDXXGXGGGGXGEGXGXRXXGGG 458
G G GG G G GGG G GGG G G G GGG
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 29.1 bits (62), Expect = 0.88
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -2
Query: 667 GXXXRXGGEGDXXGVRXXXAXGEGX-GGGXSXWXQGXGTXGGGGXXLXVDXXGXGGGG 497
G GG G G G G GGG + G G GGG G GG G
Sbjct: 215 GEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 545 GRPXPDXGXXXXGGGGGGXGXXGEXRGG-GGGXG 447
G P P G GG GG G GG GGG G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -1
Query: 509 GGGGGGXGXXGEXRGG-GGGXG 447
GG GGG G G GG GGG G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPG 266
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.023
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 10/103 (9%)
Frame = +2
Query: 485 SLXXPPPPP------SXXIHXQAXAAPXXRPXALXPXRXPPPXPLPXSXXXTHPRXVXLP 646
SL PPPPP S + Q +AP P P P PL S ++P
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPA 394
Query: 647 XP----PXXXPVXRXXRXPXVXSPIXRXXPPTXGHHLXPXAXP 763
P P P+ R P PP+ L P A P
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 33.5 bits (73), Expect = 0.041
Identities = 21/76 (27%), Positives = 25/76 (32%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPX 607
PP P PP ++ PP PP A A P P PP P P
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP---PLGNASRTSTPPVPTPP 421
Query: 608 SXXXTHPRXVXLPXPP 655
S + P + PP
Sbjct: 422 SLPPSAPPSLPPSAPP 437
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLP 604
PP+ P L P + PP PPS I A P PPP P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/83 (26%), Positives = 24/83 (28%)
Frame = +2
Query: 443 PXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPXSXXXT 622
P + PP P P PPS + A AAP P A P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMG--APAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 623 HPRXVXLPXPPXXXPVXRXXRXP 691
P P P PV P
Sbjct: 473 APAPPPAPAPAPAAPVASIAELP 495
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 428 PPAXXPXLXH-PPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXP 598
PP+ P L P P P S PP P+ AAP P A P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM-----PAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 4.7
Identities = 25/87 (28%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +2
Query: 428 PPAXXPXLXHP-PPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLP 604
PP P L P PP P P + PP S AP A+ PP P P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNS----PPRPIAPVSMNPAIN-STSKPPLPPP 295
Query: 605 XSXXXTHPRXVXLPXPPXXXPVXRXXR 685
S PP P R R
Sbjct: 296 SSRVSAAALAANKKRPPPPPPPSRRNR 322
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.031
Identities = 33/148 (22%), Positives = 40/148 (27%), Gaps = 1/148 (0%)
Frame = +2
Query: 431 PAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPXS 610
P+ P + P P P PP P + AP P P PP P+P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 611 XXXTHPRXVXLPXPPXXXPVXRXXRXPXVXSPIXRXXP-PTXGHHLXPXAXPLSXXXXXX 787
V P PV P V P P P + P P +
Sbjct: 1139 APPVPKPSVAAP------PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA------ 1186
Query: 788 XXXXXXXXXXXXXXIPHPXXHXSPXPPP 871
+P P P PPP
Sbjct: 1187 -GVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 30.3 bits (65), Expect = 0.38
Identities = 26/105 (24%), Positives = 32/105 (30%), Gaps = 6/105 (5%)
Frame = +2
Query: 431 PAXXPXLXHPPPXXPXPXSLXX----PPPPPSXXIHXQAXAAPXXRPXALXPXRXPP-PX 595
P+ P + P P P S PPP P+ + AP P P PP P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 596 PLPXSXXXTHPRXVXLPXP-PXXXPVXRXXRXPXVXSPIXRXXPP 727
P + P P P P P P+ PP
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 29.5 bits (63), Expect = 0.66
Identities = 26/102 (25%), Positives = 32/102 (31%), Gaps = 1/102 (0%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPX 607
PP P PP P PPP + + + P P + P P LP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 608 SXXXTHPRXVXLPXPPXXXPVXRXXRXPXVXSPIXRXXP-PT 730
T + +P P P R V SP P PT
Sbjct: 1229 VPVPT-AKAPPVPAPSSEAPSVSTPR-SSVPSPHSNASPSPT 1268
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/101 (24%), Positives = 32/101 (31%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPX 607
PP P + PP P P PP P + P P P PP P P
Sbjct: 1102 PPVPKPSVAVPP--VPAPSGA---PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP- 1155
Query: 608 SXXXTHPRXVXLPXPPXXXPVXRXXRXPXVXSPIXRXXPPT 730
S P+ + PP P P + + PP+
Sbjct: 1156 SGAPPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Score = 27.1 bits (57), Expect = 3.5
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 7/83 (8%)
Frame = +2
Query: 428 PPAXXPXLXHPP-------PXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXP 586
PP P + PP P P P P P PS I A P + P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP--VPPPSEA 1197
Query: 587 PPXPLPXSXXXTHPRXVXLPXPP 655
PP P P P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 26.2 bits (55), Expect = 6.2
Identities = 26/106 (24%), Positives = 29/106 (27%), Gaps = 7/106 (6%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQA---XAAPXXRPXALXPXRXPPPXP 598
P A P + P P P PP P S A AP ++ PP P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 599 LPXSXXXTHPRXVXLPXPP----XXXPVXRXXRXPXVXSPIXRXXP 724
P V P P PV P V P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 544 PXXSSPXPATXXTXPPPPPPXQPXXXAPPXRXPP 645
P S+P P PPPP P PP PP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 541 RPXXSSPXPATXXTXPPPPPPXQPXXXAPPXRXPP 645
RP ++P + T PPPP P APP P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 429 PPRXXXXXTTPPPXXLXPXPSPXPPPPXP 515
PP+ PPP + P PS P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.12
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 566 GXGDEXXGRPXPDXGXXXXGGGGGG--XGXXGEXRGGGGGXGXXXPRGG 426
G G GR + G GGG GG G G RGG GG G RGG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG--GARGG 56
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = -2
Query: 685 TXXAXDGXXXRXGGEGDXXGVRXXXAXGEG--XGGGXSXWXQGXGTXGGGGXXLXVDXXG 512
T + G GG G G R G G GGG G G GG G
Sbjct: 4 TPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Query: 511 XGGGGXG 491
GG G
Sbjct: 64 RGGAKGG 70
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 598 GXGGGXSXWXQGXGTXGGGGXXLXVDXXGXGGGGXGEGXGXRXXGGG 458
G GG G G GG G GGG G G R GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 509 GGGGGGXGXXGEXRGGGGGXGXXXPRGG 426
GG GG G G GG GG G RGG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGG--RGG 34
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -1
Query: 509 GGGGGGXGXXGEXRGGGGG--XGXXXPRGG 426
GG GG G G RGG GG G +GG
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = -1
Query: 539 PXPDXGXXXXGGG----GGGXGXXGEXRGGGGGXGXXXPRGG 426
P G GG GG G G RGG G G RGG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 25.8 bits (54), Expect = 8.2
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 649 GGEGDXXGVRXXXAXGEGXGGGXSXWXQGXGTXGGGGXXLXVDXXGXGGGGXGEGXGXRX 470
GG G G R G G GG G G GGG G GG G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGG------GRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Query: 469 XGGG 458
GG
Sbjct: 63 GRGG 66
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.12
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 488 LXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPXSXXXTHPRXVXLPXPPXXXP 667
L PPPPP I AP P PPP P P P P PP P
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP-----PPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.29
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPP 592
PPA P + PPP P P PPPP A +A R A P P P
Sbjct: 753 PPA--PIMGGPPPPPPPPGVAGAGPPPPPPP--PPAVSAGGSRYYAPAPQAEPEP 803
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 538 GRPXXSSPXPATXXTXPPPPPPXQPXXXA 624
G P P P PPPPPP P A
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Frame = +2
Query: 458 PPPXX--PXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXP 598
PPP P P P PPP+ + P P PPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 459 PPPXXLXPXPSPXPPPP 509
PPP + P P PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPP 768
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.66
Identities = 26/96 (27%), Positives = 31/96 (32%), Gaps = 3/96 (3%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRP---XALXPXRXPPPXP 598
PP L PP P S+ P P + I +A P P P + PP P
Sbjct: 130 PPTPQSEL-RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 599 LPXSXXXTHPRXVXLPXPPXXXPVXRXXRXPXVXSP 706
S P V P P PV P +P
Sbjct: 189 SLPSAVPPMPPKVP-PPPLSQAPVANTSSRPSSFAP 223
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Frame = +1
Query: 523 PXSGXGRPXXSSPXPATXXTXP---PP-----PPPXQPXXXAPPXRXPP 645
P S RP P PA+ P PP PPP QP A P + PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP---AAPVKSPP 185
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 453 TTPPPXXLXPXPSPXPPPPXP 515
T+ PP P PSP PP P
Sbjct: 141 TSAPPRPSIPPPSPASAPPIP 161
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 586 PPPPPPXQPXXXAPPXRXPP 645
PPPPPP P PP + PP
Sbjct: 9 PPPPPP--PPGFEPPSQPPP 26
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 586 PPPPPPXQPXXXAPPXRXPP 645
PPPPPP PP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 459 PPPXXLXPXPSPXPPPP 509
PPP P P PPPP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 520 YPXSGXGRPXXSSPXPATXXTXPPPPPPXQPXXXAPPXRXPP 645
+P + +P S ++ T PPPPP AP PP
Sbjct: 887 FPGASSAQPAAMS-RTSSVSTLPPPPPTASMTASAPAIASPP 927
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 586 PPPPPPXQP 612
PPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 22.6 bits (46), Expect(2) = 2.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 553 SSPXPATXXTXPPPPPP 603
SS A PPPPPP
Sbjct: 296 SSGDSANGGLPPPPPPP 312
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 586 PPPPPPXQPXXXA 624
PPPPPP P A
Sbjct: 945 PPPPPPPPPLVSA 957
Score = 21.8 bits (44), Expect(2) = 3.3
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = +1
Query: 544 PXXSSPXPATXXTXPPPPPPXQP 612
P ++ P PPPPP P
Sbjct: 892 PNDATSLPTIITHPTPPPPPPLP 914
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/80 (23%), Positives = 22/80 (27%)
Frame = +2
Query: 428 PPAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPX 607
PP+ P P PPPPP + QA A P P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTY 227
Query: 608 SXXXTHPRXVXLPXPPXXXP 667
+ P P PP P
Sbjct: 228 TPKQADPLPAPPPPPPPTLP 247
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +2
Query: 461 PPXXPXPXSLXXPPPPPSXXIHXQAXAAPXXRPXALXPXR 580
P P P + PP P+ + +A + P RP + P +
Sbjct: 893 PAPIPAPVAEPAPPAAPAKEVVEKAPSPPATRPKSTTPQK 932
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 456 TPPPXXLXPXPSPXPPPPXPXXST 527
TP P P P PPP P ST
Sbjct: 228 TPKQADPLPAPPPPPPPTLPPQST 251
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 586 PPPPPPXQPXXXAPPXRXPP 645
PPPPPP Q A PP
Sbjct: 206 PPPPPPQQNYPPAASSSAPP 225
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +2
Query: 431 PAXXPXLXHPPPXX-PXPXSLXXPPPPP 511
PA P + PP P P PPPPP
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPP 748
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 431 PAXXPXLXHPPPXXPXPXSLXXPPPPPSXXIH 526
PA P + H PP P S+ P PP+ H
Sbjct: 734 PAPTPAVKHHPPPPPVRSSI-SPSMPPAPLTH 764
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/85 (21%), Positives = 25/85 (29%)
Frame = +2
Query: 497 PPPPPSXXIHXQAXAAPXXRPXALXPXRXPPPXPLPXSXXXTHPRXVXLPXPPXXXPVXR 676
PPPPP + P P + P PP S P V L P+
Sbjct: 1882 PPPPPPMAL--PKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSS 1939
Query: 677 XXRXPXVXSPIXRXXPPTXGHHLXP 751
P + + P + + P
Sbjct: 1940 MPNAPPSVASNAKLPPASNNRKVDP 1964
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 506 GGGGGXGXXGEXRGGGGGXGXXXPRGG 426
GG G G RGG GG RGG
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,541,293
Number of Sequences: 5004
Number of extensions: 20372
Number of successful extensions: 413
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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