Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_O20
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35234-1|AAC50299.1| 1948|Homo sapiens protein tyrosine phosphat... 38 0.048
BC104812-1|AAI04813.1| 1501|Homo sapiens protein tyrosine phosph... 38 0.048
AC005338-1|AAC27825.1| 475|Homo sapiens PTPsigma, partial CDS p... 38 0.048
AB209333-1|BAD92570.1| 1560|Homo sapiens protein tyrosine phosph... 38 0.048
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 31 5.5
U41725-1|AAD09360.1| 1502|Homo sapiens PTPsigma-(brain) protein. 31 5.5
U40317-1|AAC50567.1| 1911|Homo sapiens PTPsigma protein. 31 5.5
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 31 5.5
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 31 5.5
>U35234-1|AAC50299.1| 1948|Homo sapiens protein tyrosine phosphatase
sigma protein.
Length = 1948
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 267 PXXXWKQGSXWLTPEXN-TVSKHVLTLTNVTEEGKYTCV 380
P W QG+ LTPE + V ++VL LT+V + YTCV
Sbjct: 274 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCV 312
>BC104812-1|AAI04813.1| 1501|Homo sapiens protein tyrosine
phosphatase, receptor type, S protein.
Length = 1501
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 267 PXXXWKQGSXWLTPEXN-TVSKHVLTLTNVTEEGKYTCV 380
P W QG+ LTPE + V ++VL LT+V + YTCV
Sbjct: 261 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCV 299
>AC005338-1|AAC27825.1| 475|Homo sapiens PTPsigma, partial CDS
protein.
Length = 475
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 267 PXXXWKQGSXWLTPEXN-TVSKHVLTLTNVTEEGKYTCV 380
P W QG+ LTPE + V ++VL LT+V + YTCV
Sbjct: 135 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCV 173
>AB209333-1|BAD92570.1| 1560|Homo sapiens protein tyrosine
phosphatase, receptor type, sigma isoform 3 precursor
variant protein.
Length = 1560
Score = 37.9 bits (84), Expect = 0.048
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 267 PXXXWKQGSXWLTPEXN-TVSKHVLTLTNVTEEGKYTCV 380
P W QG+ LTPE + V ++VL LT+V + YTCV
Sbjct: 287 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCV 325
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 403 LQXTXAVKIRTLPRTPXXVHMSDVTDTSAQLEWSYSYIPGTDDPXHYHLXLKPK 564
++ AVK P P V ++DV+ TSA L W G Y + ++PK
Sbjct: 17704 VETVDAVKAAEPPSPPGKVTLTDVSQTSASLMWEKPEHDGGSRVLGYVVEMQPK 17757
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 412 TXAVKIRTLPRTPXXVHMSDVTDTSAQLEWSYSYIPGTDDPXHYHL 549
T VK+ P P + + DVT SA L W G +YH+
Sbjct: 19772 TLVVKVLDTPGPPTNITVQDVTKESAVLSWDVPENDGGAPVKNYHI 19817
>U41725-1|AAD09360.1| 1502|Homo sapiens PTPsigma-(brain) protein.
Length = 1502
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 267 PXXXWKQGSXWLTPEXN-TVSKHVLTLTNVTEEGKY-TCV 380
P W QG+ LTPE + V ++VL LT+V + Y CV
Sbjct: 261 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYHPCV 300
>U40317-1|AAC50567.1| 1911|Homo sapiens PTPsigma protein.
Length = 1911
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 267 PXXXWKQGSXWLTPEXN-TVSKHVLTLTNVTEEGKY-TCV 380
P W QG+ LTPE + V ++VL LT+V + Y CV
Sbjct: 261 PYVKWMQGAEDLTPEDDMPVGRNVLELTDVKDSANYHPCV 300
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 403 LQXTXAVKIRTLPRTPXXVHMSDVTDTSAQLEWSYSYIPGTDDPXHYHLXLKPK 564
++ AVK P P V ++DV+ TSA L W G Y + ++PK
Sbjct: 25128 VETVDAVKAAEPPSPPGKVTLTDVSQTSASLMWEKPEHDGGSRVLGYVVEMQPK 25181
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 412 TXAVKIRTLPRTPXXVHMSDVTDTSAQLEWSYSYIPGTDDPXHYHL 549
T VK+ P P + + DVT SA L W G +YH+
Sbjct: 27196 TLVVKVLDTPGPPTNITVQDVTKESAVLSWDVPENDGGAPVKNYHI 27241
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 403 LQXTXAVKIRTLPRTPXXVHMSDVTDTSAQLEWSYSYIPGTDDPXHYHLXLKPK 564
++ AVK P P V ++DV+ TSA L W G Y + ++PK
Sbjct: 17704 VETVDAVKAAEPPSPPGKVTLTDVSQTSASLMWEKPEHDGGSRVLGYVVEMQPK 17757
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 412 TXAVKIRTLPRTPXXVHMSDVTDTSAQLEWSYSYIPGTDDPXHYHL 549
T VK+ P P + + DVT SA L W G +YH+
Sbjct: 19772 TLVVKVLDTPGPPTNITVQDVTKESAVLSWDVPENDGGAPVKNYHI 19817
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,528,000
Number of Sequences: 237096
Number of extensions: 1230883
Number of successful extensions: 3735
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3735
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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