Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_O20
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    27   0.30 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    27   0.30 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.70 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 221 GGTVTLKCSATGSPNP 268
           G  V+LKCSA G+P P
Sbjct: 436 GPAVSLKCSAAGNPTP 451


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 221 GGTVTLKCSATGSPNP 268
           G  V+LKCSA G+P P
Sbjct: 436 GPAVSLKCSAAGNPTP 451


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +1

Query: 127 GLXSAPAKARRKCAIIC---RSSLSTSSNCICRSGRH 228
           G+ S P++A     + C   R SL T    +CRS RH
Sbjct: 315 GISSTPSQASSCSCLDCDEIRESLDTQFLQVCRSRRH 351


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 221 GGTVTLKCSATGSPNP 268
           G  V +KC  TG+P P
Sbjct: 325 GDNVEIKCDVTGTPPP 340


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 221 GGTVTLKCSATGSPNP 268
           G ++ LKC A+G+P P
Sbjct: 408 GPSMFLKCVASGNPTP 423


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 501 VVFLHPRDRRSXSLPLXFET*AXKH*TSGYXXRGREQVS 617
           V  LH  D +   +P   E    K+  SG   R RE+ +
Sbjct: 131 VAILHRPDTKDLPVPPLTEVFPDKYMDSGIFSRAREEAN 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,369
Number of Sequences: 438
Number of extensions: 2027
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)