Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_O14
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0241 - 13243938-13244453,13244538-13246334                       31   1.6  
12_01_0193 + 1436165-1437247                                           28   8.8  

>04_03_0241 - 13243938-13244453,13244538-13246334
          Length = 770

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 206 RGSSADRAESQHQREDESAKDGTKGRGTERXEXP 105
           RG   DR + + +R + S +DG +GRG  R E P
Sbjct: 328 RGGRDDRGD-RDERGERSVRDGRRGRGGRRNERP 360


>12_01_0193 + 1436165-1437247
          Length = 360

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 209 PVAALQAXCASGPQRSRWLHQS 274
           P A+L   C+SGP   +W+H++
Sbjct: 208 PKASLWTWCSSGPSARQWIHKT 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,556,828
Number of Sequences: 37544
Number of extensions: 179149
Number of successful extensions: 404
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)