Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_O14
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98256-3|CAB10915.2|  580|Homo sapiens synapsin III protein.           31   4.3  
Z83846-3|CAB62947.2|  580|Homo sapiens synapsin III protein.           31   4.3  
Z82246-1|CAI18775.1|  580|Homo sapiens synapsin III protein.           31   4.3  
Z82181-1|CAI18771.1|  580|Homo sapiens synapsin III protein.           31   4.3  
Z80902-1|CAI18794.1|  580|Homo sapiens synapsin III protein.           31   4.3  
Z71183-1|CAB63144.2|  580|Homo sapiens synapsin III protein.           31   4.3  
CR456589-1|CAG30475.1|  580|Homo sapiens SYN3 protein.                 31   4.3  
BC117460-1|AAI17461.1|  579|Homo sapiens synapsin III protein.         31   4.3  
BC075066-1|AAH75066.1|  580|Homo sapiens synapsin III protein.         31   4.3  
BC075065-1|AAH75065.1|  580|Homo sapiens synapsin III, isoform I...    31   4.3  
AF046873-1|AAC15101.1|  580|Homo sapiens synapsin IIIa protein.        31   4.3  
AB209684-1|BAD92921.1|  611|Homo sapiens Synapsin-3 variant prot...    31   4.3  

>Z98256-3|CAB10915.2|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>Z83846-3|CAB62947.2|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>Z82246-1|CAI18775.1|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>Z82181-1|CAI18771.1|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>Z80902-1|CAI18794.1|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>Z71183-1|CAB63144.2|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>CR456589-1|CAG30475.1|  580|Homo sapiens SYN3 protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>BC117460-1|AAI17461.1|  579|Homo sapiens synapsin III protein.
          Length = 579

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 390 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 430


>BC075066-1|AAH75066.1|  580|Homo sapiens synapsin III protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>BC075065-1|AAH75065.1|  580|Homo sapiens synapsin III, isoform IIIa
           protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>AF046873-1|AAC15101.1|  580|Homo sapiens synapsin IIIa protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431


>AB209684-1|BAD92921.1|  611|Homo sapiens Synapsin-3 variant
           protein.
          Length = 611

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 184 ARSALLPRPGGXSSSXLRXWAATFALASSK-RVQLXPSXGK 303
           ++ + LP PGG + S LR WA     A S  + QL P  G+
Sbjct: 422 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 462


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,492,464
Number of Sequences: 237096
Number of extensions: 985291
Number of successful extensions: 4360
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4360
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)