Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_O04
         (1137 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    27   0.23 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   5.0  

>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
            protein.
          Length = 199

 Score = 27.5 bits (58), Expect = 0.23
 Identities = 29/121 (23%), Positives = 33/121 (27%)
 Frame = +1

Query: 763  PLXAPSARXPXSXPXPXPPPFXVXCTPXLXTRPXLXGQXPXPTXHRSAPQLSRRXXXPAP 942
            P   P    P   P P PP   +         P        P      P+L RR   P  
Sbjct: 37   PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRL-RREAEPEA 95

Query: 943  RPXXSXPXRATHPSXPXPLAXFIAXAXAXRRXPSPAXLVGXATPHXLQPVXARPXSPXAP 1122
             P  + P     P  P P     A   A      P  +     PH   P   R   P A 
Sbjct: 96   EPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH---PRLRREAKPEAE 152

Query: 1123 P 1125
            P
Sbjct: 153  P 153


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 27/117 (23%), Positives = 31/117 (26%)
 Frame = +1

Query: 775  PSARXPXSXPXPXPPPFXVXCTPXLXTRPXLXGQXPXPTXHRSAPQLSRRXXXPAPRPXX 954
            P    P     P PP   +         P        P      P+L RR   P   P  
Sbjct: 153  PGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRL-RREAEPEAEPGN 211

Query: 955  SXPXRATHPSXPXPLAXFIAXAXAXRRXPSPAXLVGXATPHXLQPVXARPXSPXAPP 1125
            + P     P  P P     A   A      P  +     PH   P   R   P A P
Sbjct: 212  NRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH---PRLRREAKPEAKP 265


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 19/73 (26%), Positives = 21/73 (28%)
 Frame = +1

Query: 907  PQLSRRXXXPAPRPXXSXPXRATHPSXPXPLAXFIAXAXAXRRXPSPAXLVGXATPHXLQ 1086
            P   RR   P   P  + P     P  P P     A   A      P  +     PH   
Sbjct: 29   PTRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPH--- 85

Query: 1087 PVXARPXSPXAPP 1125
            P   R   P A P
Sbjct: 86   PRLRREAEPEAEP 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,524
Number of Sequences: 438
Number of extensions: 2798
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 38439819
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)