Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_O01
         (914 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.       153   2e-39
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.       153   2e-39
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.       153   2e-39
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   3.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score =  153 bits (372), Expect = 2e-39
 Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = +2

Query: 122 SFLITLICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQ 301
           SFL  +  A  +++   + ICVP  + K C +M        + + CI  RDR EC+  V 
Sbjct: 19  SFLFVI--AAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVG 76

Query: 302 QRXADFVPVDPEDXYVAAK----IPNQDFVVFQEYXTDEEPDAPFRYEAVXVIXXDLPIX 469
           ++ AD V VDPED Y+A K      N  + V ++  T EEP AP+RYEAV VI  DLPI 
Sbjct: 77  KKEADVVAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPIN 136

Query: 470 XLDQLKGLXSCHTGVXXNVGYKIPLXMLXKRAVFPXMNDHXISPKDNALXXXSTFXPKSC 649
            +  L+GL SCHTGV  NVGYKIP+  L    V   ++D   S ++N L   S+   K C
Sbjct: 137 NVQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGC 196

Query: 650 IXXXWSPDP 676
           +   WSPDP
Sbjct: 197 LVGTWSPDP 205



 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +2

Query: 254 DCIPARDRMECLNYVQQRXADFVPVDPEDXYVAAKIPNQDFVVFQEYXTDEEPDAPFRYE 433
           DC   + + +CL  +++  AD   V       A K  N   ++ + Y +           
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473

Query: 434 AVXVIXXDLPIXXLDQLKGLXSCHTGVXXN-VGYKIPLXMLXKRAVFPXMND 586
           AV V+     I  L+ L+   SCH+G   +  G+  P+  L ++ +    N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score =  153 bits (372), Expect = 2e-39
 Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = +2

Query: 122 SFLITLICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQ 301
           SFL  +  A  +++   + ICVP  + K C +M        + + CI  RDR EC+  V 
Sbjct: 19  SFLFVI--AAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVG 76

Query: 302 QRXADFVPVDPEDXYVAAK----IPNQDFVVFQEYXTDEEPDAPFRYEAVXVIXXDLPIX 469
           ++ AD V VDPED Y+A K      N  + V ++  T EEP AP+RYEAV VI  DLPI 
Sbjct: 77  KKEADVVAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPIN 136

Query: 470 XLDQLKGLXSCHTGVXXNVGYKIPLXMLXKRAVFPXMNDHXISPKDNALXXXSTFXPKSC 649
            +  L+GL SCHTGV  NVGYKIP+  L    V   ++D   S ++N L   S+   K C
Sbjct: 137 NVQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGC 196

Query: 650 IXXXWSPDP 676
           +   WSPDP
Sbjct: 197 LVGTWSPDP 205



 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +2

Query: 254 DCIPARDRMECLNYVQQRXADFVPVDPEDXYVAAKIPNQDFVVFQEYXTDEEPDAPFRYE 433
           DC   + + +CL  +++  AD   V       A K  N   ++ + Y +           
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473

Query: 434 AVXVIXXDLPIXXLDQLKGLXSCHTGVXXN-VGYKIPLXMLXKRAVFPXMND 586
           AV V+     I  L+ L+   SCH+G   +  G+  P+  L ++ +    N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score =  153 bits (372), Expect = 2e-39
 Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = +2

Query: 122 SFLITLICACVNAAKTTYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQ 301
           SFL  +  A  +++   + ICVP  + K C +M        + + CI  RDR EC+  V 
Sbjct: 19  SFLFVI--AAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVG 76

Query: 302 QRXADFVPVDPEDXYVAAK----IPNQDFVVFQEYXTDEEPDAPFRYEAVXVIXXDLPIX 469
           ++ AD V VDPED Y+A K      N  + V ++  T EEP AP+RYEAV VI  DLPI 
Sbjct: 77  KKEADVVAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPIN 136

Query: 470 XLDQLKGLXSCHTGVXXNVGYKIPLXMLXKRAVFPXMNDHXISPKDNALXXXSTFXPKSC 649
            +  L+GL SCHTGV  NVGYKIP+  L    V   ++D   S ++N L   S+   K C
Sbjct: 137 NVQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGC 196

Query: 650 IXXXWSPDP 676
           +   WSPDP
Sbjct: 197 LVGTWSPDP 205



 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
 Frame = +2

Query: 254 DCIPARDRMECLNYVQQRXADFVPVDPEDXYVAAKIPNQDFVVFQEYXTDEEPDAPFRYE 433
           DC   + + +CL  +++  AD   V       A K  N   ++ + Y +           
Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473

Query: 434 AVXVIXXDLPIXXLDQLKGLXSCHTGVXXN-VGYKIPLXMLXKRAVFPXMND 586
           AV V+     I  L+ L+   SCH+G   +  G+  P+  L ++ +    N+
Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 116 NISFLITLICACVNAAKTTYK 178
           NIS  + ++  C+NA K+T K
Sbjct: 107 NISIDVKMLSECINANKSTDK 127


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/26 (34%), Positives = 9/26 (34%)
 Frame = +3

Query: 831 PXXPXXPXPPXXPXXPSPPXXPXXPP 908
           P  P    PP     P P   P  PP
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPPGAPP 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,803
Number of Sequences: 438
Number of extensions: 4687
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)