Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_N14
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000196-5|AAC24255.2|  140|Caenorhabditis elegans Hypothetical ...   138   4e-33
AF000196-6|ABC71844.1|  137|Caenorhabditis elegans Hypothetical ...   137   8e-33
AC024842-4|AAY43991.1|  703|Caenorhabditis elegans Hypothetical ...    30   2.3  
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ...    30   2.3  
AC024842-2|ABA00150.1|  604|Caenorhabditis elegans Hypothetical ...    30   2.3  
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ...    30   2.3  
U64833-9|AAS47683.1|  312|Caenorhabditis elegans Serpentine rece...    29   3.1  

>AF000196-5|AAC24255.2|  140|Caenorhabditis elegans Hypothetical
           protein B0041.6a protein.
          Length = 140

 Score =  138 bits (334), Expect = 4e-33
 Identities = 63/119 (52%), Positives = 89/119 (74%)
 Frame = +3

Query: 177 MSSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGKCNNPNGHGHNYVVLVTVKGPVDP 356
           M  +PIV++ R ++FS+AHRLHS  LSD ENK+ +GKCNN NGHGHNYV  V ++G VDP
Sbjct: 1   MFRMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDP 60

Query: 357 QTGMVMNITDLKKYIKTAILEPLDHKXLDNDVPYFXTMASTTENVAIYVWDQLXRIMXN 533
            +GMV ++  LKK + + +L+ +DH+ LD DV +F T  ST+ENVAIY++++L  +M N
Sbjct: 61  TSGMVYDLAKLKKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSN 118


>AF000196-6|ABC71844.1|  137|Caenorhabditis elegans Hypothetical
           protein B0041.6b protein.
          Length = 137

 Score =  137 bits (332), Expect = 8e-33
 Identities = 62/116 (53%), Positives = 88/116 (75%)
 Frame = +3

Query: 186 LPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGKCNNPNGHGHNYVVLVTVKGPVDPQTG 365
           +PIV++ R ++FS+AHRLHS  LSD ENK+ +GKCNN NGHGHNYV  V ++G VDP +G
Sbjct: 1   MPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSG 60

Query: 366 MVMNITDLKKYIKTAILEPLDHKXLDNDVPYFXTMASTTENVAIYVWDQLXRIMXN 533
           MV ++  LKK + + +L+ +DH+ LD DV +F T  ST+ENVAIY++++L  +M N
Sbjct: 61  MVYDLAKLKKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSN 115


>AC024842-4|AAY43991.1|  703|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2c protein.
          Length = 703

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 180 SSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGK 287
           SSLP   I+++ TFSS  +  S  +++E++ K Y K
Sbjct: 171 SSLPDCQIVKQFTFSSGLQRQSVIVTEEDSMKAYCK 206


>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2b protein.
          Length = 1111

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 180 SSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGK 287
           SSLP   I+++ TFSS  +  S  +++E++ K Y K
Sbjct: 579 SSLPDCQIVKQFTFSSGLQRQSVIVTEEDSMKAYCK 614


>AC024842-2|ABA00150.1|  604|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2d protein.
          Length = 604

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 180 SSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGK 287
           SSLP   I+++ TFSS  +  S  +++E++ K Y K
Sbjct: 72  SSLPDCQIVKQFTFSSGLQRQSVIVTEEDSMKAYCK 107


>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2a protein.
          Length = 1127

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 180 SSLPIVSIIRRETFSSAHRLHSPFLSDEENKKVYGK 287
           SSLP   I+++ TFSS  +  S  +++E++ K Y K
Sbjct: 595 SSLPDCQIVKQFTFSSGLQRQSVIVTEEDSMKAYCK 630


>U64833-9|AAS47683.1|  312|Caenorhabditis elegans Serpentine
           receptor, class x protein115 protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 413 DGCFYVFLEVSYIHHHTSLRIYRTLYCYKNNIIMTVTIRIVAFTIN 276
           DGC Y+F   S     T     RTL  Y  N+++ +   I++F+IN
Sbjct: 142 DGCSYIFFVDSVSWSPTDTVCSRTLSEYVTNLVLVMA--IISFSIN 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,688,006
Number of Sequences: 27780
Number of extensions: 257978
Number of successful extensions: 489
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)