Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_N10
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0944 - 7971372-7971446,7972248-7973282                           33   0.31 
05_01_0545 - 4756266-4757510                                           32   0.71 
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    31   0.94 
06_01_0486 - 3455030-3455770                                           31   1.2  
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158...    29   3.8  
07_01_0516 - 3850252-3852870                                           29   6.7  
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411...    28   8.8  

>07_01_0944 - 7971372-7971446,7972248-7973282
          Length = 369

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 50  ILALPARPRASQQAVARCWLNHLA-RAYLLILAVGHPKPITTTM 178
           +L LPA+P    +AV R WL+    R +L   A  HP P+   +
Sbjct: 33  LLRLPAKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVL 76


>05_01_0545 - 4756266-4757510
          Length = 414

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 482 CKPS**YLRWRRQCS*VYRTSPX*CASFQ-QLYVPAP 375
           C P+  Y R  RQC+  Y   P  CA+FQ + +VP+P
Sbjct: 346 CLPNRPYQRTPRQCAAFYAAPPVDCAAFQCKPFVPSP 382


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +2

Query: 764  SXGXPXHPXVXXXXVPASPSXXPX---SLPPSPPXXXXXLSPPXXPXXP 901
            S   P  P +     PA+P   P    SLPP PP       PP  P  P
Sbjct: 1151 SDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPP 1199



 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = +2

Query: 770  GXPXHPXVXXXXVPASPSXXPXSLPPSPPXXXXXLSPPXXP 892
            G P  P       P  P   P + PP PP     L PP  P
Sbjct: 1145 GPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPP 1185


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 776 PXHPXVXXXXVPASPSXXPXSLPPSPPXXXXXLSPPXXP 892
           P  P V     P +P   P   PPSPP      +PP  P
Sbjct: 107 PTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPP 145



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = +2

Query: 776 PXHPXVXXXXVPASPSXXPXSLPPSPPXXXXXLSPPXXPXXP 901
           P  P V     P+ P   P   PPSPP      SPP     P
Sbjct: 119 PTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPPATKTCP 160


>09_01_0102 +
           1582793-1582898,1582988-1583093,1584115-1584172,
           1584676-1584745,1585132-1585197,1586374-1586429,
           1587992-1588078,1588819-1589139,1589827-1589946,
           1590747-1590881,1591529-1591605,1591681-1591756,
           1592800-1592874,1592971-1593075,1593299-1593374,
           1594482-1594617,1594702-1594804,1595186-1595298,
           1596907-1597111,1597173-1597301,1597403-1597517,
           1597710-1597795,1599108-1599203,1599615-1599751,
           1600374-1600476,1601809-1601888,1602013-1602091,
           1602241-1602298,1602489-1602586,1602673-1602767,
           1602861-1602918
          Length = 1074

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 473 RVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 595
           R+C    E+IA +E E  D+E I+ ++  ++   N +  D+
Sbjct: 649 RLCTSLGEKIAEMESEIADMERIISQRTRDMKKPNDKREDI 689


>07_01_0516 - 3850252-3852870
          Length = 872

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 812 ASPSXXPXSLPPSPPXXXXXLSPPXXPXXP 901
           +S +  P  LPP PP     L PP  P  P
Sbjct: 6   SSAAPPPRLLPPQPPPTSRPLPPPPPPPPP 35


>02_01_0558 +
           4109929-4110042,4110989-4111097,4111404-4111563,
           4111721-4111796,4111984-4112109,4112233-4112484
          Length = 278

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 494 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 601
           +R+ R+   +       KRK   ++DL SQV+ LRG
Sbjct: 124 KRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRG 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,210,814
Number of Sequences: 37544
Number of extensions: 251692
Number of successful extensions: 1316
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)