Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_N10
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 95 8e-20
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 95 8e-20
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 85 9e-17
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 85 9e-17
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 82 5e-16
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 82 5e-16
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 74 1e-13
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 37 0.017
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 34 0.12
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 34 0.12
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 33 0.28
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 33 0.28
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 32 0.64
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 31 0.85
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 31 0.85
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 25 6.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 25 7.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 7.9
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 7.9
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 7.9
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 28 7.9
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 94.7 bits (225), Expect = 8e-20
Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +2
Query: 236 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 416 XXXCGKPKNIDDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 595
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 596 RGXFXKPTLXKVSKYXNXFAXL-QKTAAEFTFRXXLXVLTXXXFXLEQXD 742
RG F KPTL KVSK F L +K A + FR L V+ F L++ D
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEED 183
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 94.7 bits (225), Expect = 8e-20
Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +2
Query: 236 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 416 XXXCGKPKNIDDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 595
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 596 RGXFXKPTLXKVSKYXNXFAXL-QKTAAEFTFRXXLXVLTXXXFXLEQXD 742
RG F KPTL KVSK F L +K A + FR L V+ F L++ D
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEED 183
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 84.6 bits (200), Expect = 9e-17
Identities = 52/157 (33%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = +2
Query: 242 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 422 XCGKPKNIDDANED-TIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR 598
++D N+ + ++ D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 599 GXFXKPTLXKVSKYXNXFAXLQKTAAEFTFRXXLXVL 709
G F KPTL KVSKY N F + + FR L V+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVV 187
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 84.6 bits (200), Expect = 9e-17
Identities = 52/157 (33%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = +2
Query: 242 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 421
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 422 XCGKPKNIDDANED-TIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR 598
++D N+ + ++ D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 599 GXFXKPTLXKVSKYXNXFAXLQKTAAEFTFRXXLXVL 709
G F KPTL KVSKY N F + + FR L V+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVV 187
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 82.2 bits (194), Expect = 5e-16
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Frame = +2
Query: 236 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 416 XXXCGKPKNIDDANED-TIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 592
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 593 LRGXFXKPTLXKVSKYXNXF--AXLQKTAAEFTFRXXLXVL 709
LRG F KP+L KVSKY N F + K + FR L ++
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIV 177
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 82.2 bits (194), Expect = 5e-16
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Frame = +2
Query: 236 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 416 XXXCGKPKNIDDANED-TIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 592
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 593 LRGXFXKPTLXKVSKYXNXF--AXLQKTAAEFTFRXXLXVL 709
LRG F KP+L KVSKY N F + K + FR L ++
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIV 177
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 74.1 bits (174), Expect = 1e-13
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +2
Query: 236 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 416 XXXCGKPKNIDDANEDT-IKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 592
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 593 LRGXFXKPTLXKVSKYXNXFAXLQKTAAE 679
LRG F KP+L KVSKY N F + + E
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKE 177
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 74.1 bits (174), Expect = 1e-13
Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +2
Query: 236 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 415
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 416 XXXCGKPKNIDDANEDT-IKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 592
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 593 LRGXFXKPTLXKVSKYXNXFAXLQKTAAE 679
LRG F KP+L KVSKY N F + + E
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKE 177
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 440 NIDDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
N + + +K + H+RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 431 KPKNIDDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
K +++ + +K H RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 175
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 431 KPKNIDDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
K +++ + +K H RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 279
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 467 IKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
+K + H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 467 IKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
+K + H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 440 NIDDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDL 574
N + + +K + H+RI +LE EK+DLE +R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 491 HERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
H RI +LE EK+DLE +R+D ++ +L+ +
Sbjct: 240 HARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 491 HERIARLEDEKFDLEYIVKRKDMEISDLNSQ 583
H RI +LE EK+DLE +R+D ++ +L+ +
Sbjct: 240 HARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 494 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 592
E I L K + E ++K+KD+E+S + S++ D
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED 1106
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.0 bits (52), Expect(2) = 6.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 830 PXSLPPSPPXXXXXLSPPXXP 892
P S PP+PP + PP P
Sbjct: 377 PPSRPPAPPSGHGMIPPPPPP 397
Score = 21.8 bits (44), Expect(2) = 6.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 809 PASPSXXPXSLPPSPP 856
P PS P PP PP
Sbjct: 363 PRYPSAGPGMYPPPPP 378
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.0 bits (52), Expect(2) = 7.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 830 PXSLPPSPPXXXXXLSPPXXP 892
P S PP+PP + PP P
Sbjct: 367 PPSRPPAPPSGHGMIPPPPPP 387
Score = 21.8 bits (44), Expect(2) = 7.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 809 PASPSXXPXSLPPSPP 856
P PS P PP PP
Sbjct: 353 PRYPSAGPGMYPPPPP 368
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 446 DDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDL 574
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 446 DDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDL 574
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 446 DDANEDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDL 574
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 458 EDTIKRVCXDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGXFXKPTLXKVS 634
ED + R+C Y + + R+ + + +LEY K K+ + + + + + + L K++
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY-EKEKNRALQETINNSSSVDSKINQEKLNKIN 728
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,490,569
Number of Sequences: 27780
Number of extensions: 185209
Number of successful extensions: 803
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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