Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_N07
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 91 3e-19
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 49 8e-07
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 48 1e-06
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 48 2e-06
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 35 0.013
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.071
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 31 0.22
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.66
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 3.5
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 90.6 bits (215), Expect = 3e-19
Identities = 44/138 (31%), Positives = 79/138 (57%)
Frame = +2
Query: 179 KAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAA 358
+AF FD ++ G+I + + ++R +GQ L+++I EVDAD +G ++F EF+T+ A
Sbjct: 16 EAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMA 75
Query: 359 KFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSXXXXXXXXXXXXXXXXXXXXXQEIDT 538
+ + + D E +E+REAF+++DK+GNGYI +E DT
Sbjct: 76 RKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADT 132
Query: 539 DGSGTVDFDEFMEMMTGE 592
DG G ++++EF +++ +
Sbjct: 133 DGDGVINYEEFSRVISSK 150
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 398 ELREAFRLYDKEGNGYIPTSSXXXXXXXXXXXXXXXXXXXXXQEIDTDGSGTVDFDEFME 577
E REAF L+D++ +G I ++ E+D DG+GT+DF EF+
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 578 MM 583
MM
Sbjct: 73 MM 74
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 49.2 bits (112), Expect = 8e-07
Identities = 34/145 (23%), Positives = 65/145 (44%)
Frame = +2
Query: 143 MXCPQNXSPSSXKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSG 322
M + + +AF +D ++ G IP V +LR +G L +L E+
Sbjct: 1 MPASKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GD 56
Query: 323 RLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSXXXXXXXXXXXXXX 502
++ +F++ + + E ++E +E +AFR++DK+ +GYI T+
Sbjct: 57 AIDEKKFMSFVSNKLRETESE---EEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSD 113
Query: 503 XXXXXXXQEIDTDGSGTVDFDEFME 577
QE D SG+ D+ +F++
Sbjct: 114 NEVQLMVQEADPTNSGSFDYYDFVQ 138
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 48.4 bits (110), Expect = 1e-06
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Frame = +2
Query: 179 KAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAA 358
K F D N+SGSI + I + P + L VD D G ++F EF+ +
Sbjct: 28 KRFIKIDANQSGSIDRNEFLSIPSVASNP----LASRLFSVVDEDGGGDVDFQEFINSLS 83
Query: 359 KFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSXXXXXXXXXXXXXXXXXXXXX----- 523
F V + E ++L+ AF++YD + +GYI
Sbjct: 84 VFSVHGNKE---EKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTI 140
Query: 524 QEIDTDGSGTVDFDEFMEMMTG 589
E+D D G + F+EF ++++G
Sbjct: 141 MEVDKDRDGKISFEEFKDIVSG 162
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 47.6 bits (108), Expect = 2e-06
Identities = 32/138 (23%), Positives = 59/138 (42%)
Frame = +2
Query: 179 KAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAA 358
+AF FD ++ +I + +R +G K + +++ + D G L+ +FV +
Sbjct: 41 EAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMT 100
Query: 359 KFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSXXXXXXXXXXXXXXXXXXXXXQEIDT 538
+ IVE D +E++ AF L+D + G I + +E D
Sbjct: 101 EKIVERDP---LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDL 157
Query: 539 DGSGTVDFDEFMEMMTGE 592
D G ++ EF+ +M E
Sbjct: 158 DQDGEINEQEFIAIMMDE 175
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/71 (19%), Positives = 29/71 (40%)
Frame = +2
Query: 374 EDAEAMQKELREAFRLYDKEGNGYIPTSSXXXXXXXXXXXXXXXXXXXXXQEIDTDGSGT 553
E E ++++ EAF+L+D + + I ++ D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 554 VDFDEFMEMMT 586
+ ++F+ +MT
Sbjct: 90 LQMEDFVRVMT 100
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 35.1 bits (77), Expect = 0.013
Identities = 24/90 (26%), Positives = 45/90 (50%)
Frame = +2
Query: 179 KAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAA 358
+AF FD + +G IP + D+LR GQ N + E I E+++ ++ +F+ +
Sbjct: 10 QAFSLFDRHGTGRIPKTSIGDLLRACGQ--NPTLAE--ITEIESTLPAEVDMEQFLQVLN 65
Query: 359 KFIVEEDAEAMQKELREAFRLYDKEGNGYI 448
+ D +E + F+++DK+ G I
Sbjct: 66 R-PNGFDMPGDPEEFVKGFQVFDKDATGMI 94
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 32.7 bits (71), Expect = 0.071
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 284 EELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYI 448
E + DADK+G ++F EF+ + V E + +L AF+LYD + NG I
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLI 116
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 185 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEF 343
++ + +S + V + +M+ + + LEE ++ DAD SG+L F EF
Sbjct: 303 WEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 29.5 bits (63), Expect = 0.66
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -1
Query: 559 VNSAASVSVDLLDEAIEFIVSQXLVQFPEDLAQARRGNVTVAFLVVQSERFPEFFLHGLS 380
VN A + + DL D AI ++Q L F +DL + VT+ + +P ++ + +S
Sbjct: 1251 VNVALTSTGDLDDSAIVSKLNQILSDFRDDLLEHNVRRVTIVGGRINKSAYPSYYTYRVS 1310
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 395 KELREAFRLYDKEGNGYI 448
+EL+EAF L DK+G+G I
Sbjct: 48 QELKEAFALLDKDGDGNI 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,336,851
Number of Sequences: 5004
Number of extensions: 38118
Number of successful extensions: 135
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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