Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_N05
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   129   2e-30
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   121   8e-28
U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  129 bits (312), Expect = 2e-30
 Identities = 59/85 (69%), Positives = 68/85 (80%)
 Frame = +1

Query: 190 LSKKS*FFLFLDIXLHVYDLGMXNRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVE 369
           L K+     ++D+ +H +DLG+ +RD TDDQVTID A A  KYNV +KCATITPDE RVE
Sbjct: 26  LIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCATITPDEARVE 85

Query: 370 EFXLKKMWKSPNGTIRNILGGTVFR 444
           EF LKKMWKSPNGTIRNILGGTVFR
Sbjct: 86  EFKLKKMWKSPNGTIRNILGGTVFR 110



 Score =  101 bits (243), Expect = 5e-22
 Identities = 52/102 (50%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
 Frame = +2

Query: 452 IICKNIPRLVTGWDKPIIIGRXAHADQYKATDFVVPGAGTLXIXFKPESG-EAIKXVVXE 628
           II KN+PRLV  W KPIIIGR AHADQYKATDFVVPGAG L I F    G + I+  V +
Sbjct: 113 IIVKNVPRLVNTWSKPIIIGRHAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFD 172

Query: 629 YQGAXVALAMFXTXXXXXXXXXXXXXXXLDXKYPLYLXTXXT 754
           ++G  V+L+M+ T               L  K+PLYL T  T
Sbjct: 173 FKGPGVSLSMYNTDDSIRDFAHASFKYALQRKFPLYLSTKNT 214



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 162 DEMTRIIWDLIKEKLILP 215
           DEMTRIIWDLIKEKLILP
Sbjct: 17  DEMTRIIWDLIKEKLILP 34


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  121 bits (291), Expect = 8e-28
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = +1

Query: 217 FLDIXLHVYDLGMXNRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFXLKKMWK 396
           +LD+ +  YDLG+  RD+T+DQVTID A AI +++VGIKCATITPDE R++EF LKKMW 
Sbjct: 57  YLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCATITPDEARIKEFNLKKMWL 116

Query: 397 SPNGTIRNILGGTVFR 444
           SPNGTIRNILGGTVFR
Sbjct: 117 SPNGTIRNILGGTVFR 132



 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +2

Query: 452 IICKNIPRLVTGWDKPIIIGRXAHADQYKATDFVVPGAGTLXIXF-KPESGEAIKXVVXE 628
           I+CKNIPRLV GW +PI IGR A  DQYK TD V+P   TL +   KP+  + +  V   
Sbjct: 135 ILCKNIPRLVPGWTQPITIGRHAFGDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDF 194

Query: 629 YQGAXVALAMFXTXXXXXXXXXXXXXXXLDXKYPLYLXTXXT 754
            +   V LAM+ T               L  ++PLYL T  T
Sbjct: 195 KKSGGVGLAMYNTDESIKGFAHSCFQYALMKQWPLYLSTKNT 236



 Score = 37.9 bits (84), Expect = 0.010
 Identities = 22/39 (56%), Positives = 23/39 (58%)
 Frame = +3

Query: 105 TTNMSKINGWTVVVDIHCADEMTRIIWDLIKEKLILPIL 221
           T    KI     VVD+   DEMTRIIW  IK KLILP L
Sbjct: 21  TQERQKIKVDNPVVDLD-GDEMTRIIWKEIKNKLILPYL 58


>U40417-9|AAA81417.2|  120|Caenorhabditis elegans Hypothetical
           protein T08A9.13 protein.
          Length = 120

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +1

Query: 274 DDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFXLKK 387
           + +  ++C +A+ +Y+V  K  T+T  E++  E   KK
Sbjct: 51  EQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,249,749
Number of Sequences: 27780
Number of extensions: 286798
Number of successful extensions: 677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)