Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_N04
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 37 0.086
BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro... 32 3.2
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein. 32 3.2
K01747-1|AAA51586.1| 330|Homo sapiens ACTA2 protein. 31 4.3
J05192-1|AAA51577.1| 377|Homo sapiens ACTA3 protein. 31 4.3
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 31 7.5
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 31 7.5
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 31 7.5
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 31 7.5
AF439409-1|AAL48216.1| 553|Homo sapiens G-protein-coupled recep... 30 9.9
AF282269-1|AAL33880.1| 553|Homo sapiens G protein-coupled recep... 30 9.9
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 37.1 bits (82), Expect = 0.086
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 481 AG*EKGSTEACSSTLLLPRASTEPTARVSTCPLLTRSIPTSSLTAXS 621
AG S+ +S+ L PR S+ T R+S CP + ++P S+ +A S
Sbjct: 63 AGMRPASSATAASSQLEPRVSSPKTIRISVCPAMRNNMPCSAFSAKS 109
>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
protein rA9 protein.
Length = 1649
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -1
Query: 578 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 399
+G E +VGS G S EH S E++E S EDSED DG LE+
Sbjct: 28 AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 86
Query: 398 VG 393
G
Sbjct: 87 AG 88
>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
Length = 1654
Score = 31.9 bits (69), Expect = 3.2
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -1
Query: 578 SGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLEL 399
+G E +VGS G S EH S E++E S EDSED DG LE+
Sbjct: 33 AGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEV 91
Query: 398 VG 393
G
Sbjct: 92 AG 93
>K01747-1|AAA51586.1| 330|Homo sapiens ACTA2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 315 MNVDVVKQFMEMYKMGMLP-RGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACW 485
M +D+ + + Y M +L RG +FV T E ++ +K ++ Y A DF+ M TA W
Sbjct: 178 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKE-KLCYVALDFENEMATAAW 234
>J05192-1|AAA51577.1| 377|Homo sapiens ACTA3 protein.
Length = 377
Score = 31.5 bits (68), Expect = 4.3
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 315 MNVDVVKQFMEMYKMGMLP-RGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACW 485
M +D+ + + Y M +L RG +FV T E ++ +K ++ Y A DF+ M TA W
Sbjct: 178 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKE-KLCYVALDFENEMATAAW 234
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 740 PPXLIPNDVMSYSWRPSXLTPPCXXSPXPS 829
PP +P+ ++ +S P LTPP SP P+
Sbjct: 255 PPAPVPSPLVGFSQFPQQLTPPRSPSPEPT 284
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 740 PPXLIPNDVMSYSWRPSXLTPPCXXSPXPS 829
PP +P+ ++ +S P LTPP SP P+
Sbjct: 255 PPAPVPSPLVGFSQFPQQLTPPRSPSPEPT 284
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 740 PPXLIPNDVMSYSWRPSXLTPPCXXSPXPS 829
PP +P+ ++ +S P LTPP SP P+
Sbjct: 255 PPAPVPSPLVGFSQFPQQLTPPRSPSPEPT 284
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 740 PPXLIPNDVMSYSWRPSXLTPPCXXSPXPS 829
PP +P+ ++ +S P LTPP SP P+
Sbjct: 255 PPAPVPSPLVGFSQFPQQLTPPRSPSPEPT 284
>AF439409-1|AAL48216.1| 553|Homo sapiens G-protein-coupled receptor
kinase 7 protein.
Length = 553
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -1
Query: 686 VVFPEDRVLXGFSHLHHXGFTDDXAVXEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHA 507
V+F ++ G HLH G E V +D + + ++ L + +VE +G K + + A
Sbjct: 293 VIFYSAQIACGMLHLHELGIVYRDMKPENVLLDDLGNCRLSDLGL-AVEMKGGKPITQRA 351
Query: 506 SVDPFSHP 483
+ + P
Sbjct: 352 GTNGYMAP 359
>AF282269-1|AAL33880.1| 553|Homo sapiens G protein-coupled receptor
kinase 7 protein.
Length = 553
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -1
Query: 686 VVFPEDRVLXGFSHLHHXGFTDDXAVXEEVGIDLVRSGQVETLAVGSVEARGSKSVDEHA 507
V+F ++ G HLH G E V +D + + ++ L + +VE +G K + + A
Sbjct: 293 VIFYSAQIACGMLHLHELGIVYRDMKPENVLLDDLGNCRLSDLGL-AVEMKGGKPITQRA 351
Query: 506 SVDPFSHP 483
+ + P
Sbjct: 352 GTNGYMAP 359
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,417,847
Number of Sequences: 237096
Number of extensions: 2092324
Number of successful extensions: 6170
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6070
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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