Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_M15
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 32 3.4
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 3.4
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 32 3.4
AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein. 32 3.4
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 4.2
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 5.9
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.4
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 4/112 (3%)
Frame = +1
Query: 595 PPSMXRPXXRDXPLAYWGPFRXP---RP*XPXPRSXPLXXAVPXSPXGRP*-GXSPXLTX 762
PPS P P GP P R P P S A P P RP P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 763 XTAPAPTTXXXQQGPATTPXRPR*NXXXXXXXXXXXXXXPPPPGPXXSXXLP 918
P P P+ P P PPPPGP LP
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLP 392
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.4
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 4/112 (3%)
Frame = +1
Query: 595 PPSMXRPXXRDXPLAYWGPFRXP---RP*XPXPRSXPLXXAVPXSPXGRP*-GXSPXLTX 762
PPS P P GP P R P P S A P P RP P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 763 XTAPAPTTXXXQQGPATTPXRPR*NXXXXXXXXXXXXXXPPPPGPXXSXXLP 918
P P P+ P P PPPPGP LP
Sbjct: 341 RMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLP 392
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.4
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 4/112 (3%)
Frame = +1
Query: 595 PPSMXRPXXRDXPLAYWGPFRXP---RP*XPXPRSXPLXXAVPXSPXGRP*-GXSPXLTX 762
PPS P P GP P R P P S A P P RP P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 763 XTAPAPTTXXXQQGPATTPXRPR*NXXXXXXXXXXXXXXPPPPGPXXSXXLP 918
P P P+ P P PPPPGP LP
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLP 392
>AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.
Length = 1584
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +2
Query: 599 LXXTAPPXGTXPSRIGXPSAXPAPDXPXPGPFXXXXXFPXPPXAGXRXSPP 751
L +PP PS G P A PA P P P P PP +PP
Sbjct: 1388 LPARSPPSRQPPSG-GPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPP 1437
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 30.7 bits (66), Expect = 7.7
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 614 PPXGTXPSRIGXPSAXPAPDXPX-PGPFXXXXXFPXPPXAGXRXSPP 751
PP PS G P P P P P P P PP G PP
Sbjct: 335 PPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP 381
Score = 25.0 bits (52), Expect(3) = 4.2
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 614 PPXGTXPSRIGXPSAXPAPDXPXPGPFXXXXXFPXPPXAGXRXSPPXS 757
PP PS +G S PAP P P P PP PP S
Sbjct: 301 PPPPPLPSGLG--SLSPAPPMP---PVSAGPPLPPPPPPPPPLPPPSS 343
Score = 22.6 bits (46), Expect(3) = 4.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 878 PXPPPAPPXP 907
P PPP PP P
Sbjct: 347 PPPPPPPPLP 356
Score = 20.6 bits (41), Expect(3) = 4.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 866 SHXXPXPPPAPP 901
S P PPP PP
Sbjct: 342 SSAGPPPPPPPP 353
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.9
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 4/112 (3%)
Frame = +1
Query: 595 PPSMXRPXXRDXPLAYWGPFRXP---RP*XPXPRSXPLXXAVPXSPXGRP*-GXSPXLTX 762
PPS P P GP P R P P S A P P RP P
Sbjct: 281 PPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPN 340
Query: 763 XTAPAPTTXXXQQGPATTPXRPR*NXXXXXXXXXXXXXXPPPPGPXXSXXLP 918
P P P+ P P PPPPGP LP
Sbjct: 341 RMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLP 392
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,628,078
Number of Sequences: 237096
Number of extensions: 1454691
Number of successful extensions: 6575
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6341
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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