Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_M13
(864 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 31 0.16
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.64
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 27 3.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.0
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 278 AIAGPALINPSRTLRPTFSIFLKSFHLGSGAALTAP 171
AIA P +I+P ++RP S+F+KS A + +P
Sbjct: 202 AIADPNIISPIDSVRPLLSLFIKSITSAISALILSP 237
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 659 PPXXXXSAAPXLPXXRVTXLPPXXXPXXXXXXPPXXXXXPPASXXTXRPPXPXXXXPXXP 838
PP S AP +P V PP P P PP + PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAA-PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 839 XXXP 850
P
Sbjct: 1171 VPAP 1174
Score = 30.3 bits (65), Expect = 0.37
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +2
Query: 641 PXXXXXPPXXXXS-AAPXLPXXRVTXLPPXXXPXXXXXXPPXXXXXPPASXXTXRPPXPX 817
P PP S AAP +P V +PP P P PP + PP P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVA-VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK 1144
Query: 818 XXXPXXPXXXP 850
P P
Sbjct: 1145 PSVAAPPVPAP 1155
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/64 (25%), Positives = 18/64 (28%)
Frame = +2
Query: 659 PPXXXXSAAPXLPXXRVTXLPPXXXPXXXXXXPPXXXXXPPASXXTXRPPXPXXXXPXXP 838
PP S AP +P V P P PP + PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 839 XXXP 850
P
Sbjct: 1210 VPPP 1213
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 29.5 bits (63), Expect = 0.64
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -2
Query: 182 LTAPRASTNAKTKLKIRTKFILPKFYSAGEFKIPIQISFDANAKNDQILRIPYSESVXE 6
LT ++ K I + F+ G KIP + SFD K+ + IP+++ + E
Sbjct: 842 LTKDISTVKRKEYFGIESTSSKQPFHDTGSIKIPAKRSFDTIDKDFRSSNIPFADKIKE 900
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 136 YVRNSFYRNSIVPENSKFQYKYRSTR 59
YV S YRN + S++ YKY + +
Sbjct: 1441 YVARSMYRNDVTAGLSEYYYKYSTAK 1466
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 721 PXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
P P PP P PP PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 721 PXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
P P PP P PP PPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Frame = +3
Query: 708 LLGSPXXXPPXXXXPXPXXNXXXXXLP----XXPXXPPXPXXXPPXXPPXXPXXP 860
LL SP PP P P P P PP P PP P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 732 PPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPPXXP 851
PP P P +P P PP P P PP P
Sbjct: 1699 PPQMSAPTPPP--PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +3
Query: 756 PXXNXXXXXLPXXPXXPPXPXXXPPXXPPXXP 851
P N P P P P PP PP P
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,364,423
Number of Sequences: 5004
Number of extensions: 40282
Number of successful extensions: 156
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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