Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_M13
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 34 0.11
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 34 0.11
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.26
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.26
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.26
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.80
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.3
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 29 4.3
U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical pr... 29 5.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 6.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 6.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.9
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 711 LGSPXXXPPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPPXXPXXP 860
+G P PP P P N P P PP P PP P P P
Sbjct: 66 VGRPTESPPLPPPPLPLSNPPAKPTPPPP--PPKPTIRPPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 711 LGSPXXXPPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPPXXPXXP 860
+G P PP P P N P P PP P PP P P P
Sbjct: 288 VGRPTESPPLPPPPLPLSNPPAKPTPPPP--PPKPTIRPPPIPASPPPRP 335
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 688 GSPXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
G P G PP P PP P F PP PPPP
Sbjct: 750 GLPPISG--GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 694 PXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPPXXXP 828
P G PP P PP PP PPPP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 688 GSPXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
G P G PP P PP P F PP PPPP
Sbjct: 750 GLPPISG--GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 694 PXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPPXXXP 828
P G PP P PP PP PPPP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 688 GSPXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
G P G PP P PP P F PP PPPP
Sbjct: 333 GLPPISG--GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 694 PXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPPXXXP 828
P G PP P PP PP PPPP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 720 PXXXPPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPPXXPXXP 860
P PP P P P PP P PP PP P P
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 732 PPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPPXXPXXP 860
PP P P P P PP PP PP P P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 685 PGSPXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPPXXXP 828
P P APP PP P PP PPPP P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPP 76
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +1
Query: 670 PXXRGPGSPXXEGYXAPPXXX---PXXXXXXPPXXXPXTXXFXXXPPXPPP 813
P R PG P G PP P PP P PP PPP
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +1
Query: 670 PXXRGPGSPXXEGYXAPPXXX---PXXXXXXPPXXXPXTXXFXXXPPXPPP 813
P R PG P G PP P PP P PP PPP
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +2
Query: 659 PPXXXXSAAPXLPXXRVTXLPPXXXPXXXXXXPPXXXXXPPASXXTXRPPXPXXXXPXXP 838
PP A P P R+ P P PP PP + + PP P P P
Sbjct: 466 PPTTPKPAPP--PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 718 PPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
PP P PP P PP PPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 678 PRPRXSXX*GLLGSPXXXPPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPP 842
P PR S G SP PP P P P PP P PP PP
Sbjct: 126 PPPRKSRAGG--SSPPPPPPPRVPRTPPPRSPPPRRP--PMTPPSPQRRPPRTPP 176
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 714 GSPXXXPPXXXXPXPXXNXXXXXLPXXPXXPPXPXXXPPXXPP 842
G+P PP P +P P P P PP PP
Sbjct: 12 GNPNQPPPFPPTPYYPMYQAGMPMPYIPQSPQYPQPGPPGGPP 54
>U52002-6|AAB37732.1| 142|Caenorhabditis elegans Hypothetical
protein F08B4.7 protein.
Length = 142
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/53 (28%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +3
Query: 708 LLGSPXXXPPXXXXPXPXXNXXXXXLPXXPXXP--PXPXXXPPXXPPXXPXXP 860
++G P P P P P P P P PP PP P P
Sbjct: 84 MMGGPPGMPMMAPRPFPGPGVGFPGAPGMPPFPGGPMGMAGPPGMPPMMPRPP 136
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 6.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 688 GSPXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
G+P + PP P PP PP PPPP
Sbjct: 599 GTPENRPHAVPPPPPPP-----PPQSFGMAPISSAAPPPPPPP 636
Score = 22.2 bits (45), Expect(2) = 6.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 796 PPXPPPPXXXP 828
PP PPPP P
Sbjct: 632 PPPPPPPMGLP 642
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 6.3
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 688 GSPXXEGYXAPPXXXPXXXXXXPPXXXPXTXXFXXXPPXPPPP 816
G+P + PP P PP PP PPPP
Sbjct: 425 GTPENRPHAVPPPPPPP-----PPQSFGMAPISSAAPPPPPPP 462
Score = 22.2 bits (45), Expect(2) = 6.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 796 PPXPPPPXXXP 828
PP PPPP P
Sbjct: 458 PPPPPPPMGLP 468
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -1
Query: 858 GXXGXXXGXXGXXXXGXGGRXVXXEAGGXXXXXGGXXXXXXGXXXGGSXVTLXXGRXG 685
G G G G G GG+ AGG GG G G S G+ G
Sbjct: 77 GSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGG 134
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 864 GXGXXGXXXGXXGXXXXGXGGRXVXXEAGGXXXXXGGXXXXXXGXXXGGSXVTLXXGRXG 685
G G G G G GG GG GG G GGS G G
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG 153
Query: 684 AAXXXXXGGXXXXXG 640
GG G
Sbjct: 154 GCGGGGGGGCGGGGG 168
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 864 GXGXXGXXXGXXGXXXXGXGGRXVXXEAGGXXXXXGGXXXXXXGXXXGGSXVTLXXGRXG 685
G G G G G G GG GG GG G GG G G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 684 AAXXXXXGGXXXXXG 640
A GG G
Sbjct: 181 YAVAPSGGGGCGGGG 195
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 864 GXGXXGXXXGXXGXXXXGXGGRXVXXEAGGXXXXXGGXXXXXXGXXXGGSXVTLXXGRXG 685
G G G G G GG GG GG G GGS G G
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG 153
Query: 684 AAXXXXXGGXXXXXG 640
GG G
Sbjct: 154 GCGGGGGGGCGGGGG 168
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 864 GXGXXGXXXGXXGXXXXGXGGRXVXXEAGGXXXXXGGXXXXXXGXXXGGSXVTLXXGRXG 685
G G G G G G GG GG GG G GG G G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Query: 684 AAXXXXXGGXXXXXG 640
A GG G
Sbjct: 181 YAVAPSGGGGCGGGG 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,444,934
Number of Sequences: 27780
Number of extensions: 248220
Number of successful extensions: 1672
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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