Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_M12
         (1327 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   3.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 14/48 (29%), Positives = 15/48 (31%)
 Frame = +1

Query: 877  PXNXPXPPNPXXXPTDHPPXHXXAXPPXPPSPXXPPXTRLXAXTXPAP 1020
            P   P P  P   P   PP      P   P+   PP   L      AP
Sbjct: 577  PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAP 624


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +2

Query: 680 PPHPNXTNPXXPPXPIXRQXXTN 748
           P HP    P   P PI RQ   N
Sbjct: 378 PTHPTINTPETDPVPITRQEIIN 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.132    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,792
Number of Sequences: 2352
Number of extensions: 5953
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 153280125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)