Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP12_F_M10
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100662-1|AAC68977.1|  900|Caenorhabditis elegans Hypothetical ...    33   0.27 
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr...    32   0.63 
U97008-10|AAB52315.2|  494|Caenorhabditis elegans Cytochrome p45...    31   0.84 
AC091125-6|AAK27886.3|  474|Caenorhabditis elegans Hypothetical ...    31   1.5  
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.9  
AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical...    30   1.9  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AC024792-1|AAK84610.1|  938|Caenorhabditis elegans Importin beta...    28   7.8  

>AF100662-1|AAC68977.1|  900|Caenorhabditis elegans Hypothetical
           protein H34C03.2 protein.
          Length = 900

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 470 NGHHPPDTQYGGVQKKMP-VSSLSNLGNTCFLNSVLYTLRYAP 595
           N ++ P    G V +  P    LSNLGNTCF+ S    L   P
Sbjct: 255 NSYNSPSPSTGVVTRTTPGACGLSNLGNTCFMASAFQCLSNMP 297


>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
           protein K02C4.3 protein.
          Length = 1307

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +2

Query: 527 SSLSNLGNTCFLNSVLYTLRYAPRFLHNLHHLVSDLASVEQKLGSIRLKS 676
           + L N GNTC+LN +   L   P+F   L+H  + L+  EQ + ++++++
Sbjct: 199 TGLYNSGNTCWLNCLSQVLYSIPKFRSILYH-CAPLSWHEQPITNVKIEN 247


>U97008-10|AAB52315.2|  494|Caenorhabditis elegans Cytochrome p450
           family protein 35A2 protein.
          Length = 494

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 151 WFIDTFFRFGYKIKWHLQRTCKNIA 77
           WF+ TFF+  Y   W  Q T KN A
Sbjct: 223 WFLKTFFKHRYDKIWSAQETAKNFA 247


>AC091125-6|AAK27886.3|  474|Caenorhabditis elegans Hypothetical
           protein Y67D2.2 protein.
          Length = 474

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 524 VSSLSNLGNTCFLNSVLYTLRYAPRFL 604
           V  L+N GNTC++N++L  L   P F+
Sbjct: 44  VPGLANQGNTCYMNALLQGLASCPSFV 70


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -2

Query: 474 PFNMTELDSPSSRIASS-GFNVLS-ECFRVAVSLFTVGPADFD 352
           P   T   +PS+ +  + GFN ++ +C+R+  SL T   ADFD
Sbjct: 133 PLTTTTTPAPSNNVGCTFGFNYINGKCWRLVTSLQTRDNADFD 175


>AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical
           protein Y106G6H.12 protein.
          Length = 975

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
 Frame = +2

Query: 497 YGGVQKKMPVSSLSNLGNTCFLNSVLYTLRYAP----RF--LHNLHH 619
           Y   + K P   L N GN+C+ NS +  L   P    RF  LH L H
Sbjct: 272 YWNQEVKYPNRRLYNTGNSCYFNSTMQALSSCPSLVSRFEMLHRLRH 318


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 527 SSLSNLGNTCFLNSVLYTL 583
           + L N+GNTCF+N+VL  L
Sbjct: 423 TGLRNIGNTCFMNAVLQML 441


>Z79601-1|CAB01885.2|  716|Caenorhabditis elegans Hypothetical
           protein K09A9.4 protein.
          Length = 716

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 539 NLGNTCFLNSVLYTLRYAPRFLHNLHHLV 625
           N GNTC++N+VL  L +   F   L  L+
Sbjct: 186 NFGNTCYMNAVLQLLGHCSPFTQYLIELI 214


>AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical
           protein Y71A12B.9 protein.
          Length = 699

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 533 LSNLGNTCFLNSVLYTLRYAPRFLHNLHHLVS 628
           + N+GNTCF+N+VL  L     F   +  L S
Sbjct: 380 MRNVGNTCFMNAVLQALASISEFREYIMSLSS 411


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
 Frame = +2

Query: 248 SSGNNKENKPLKRPLKSIYSNTXXXXXXXXXXXXXXXXXGPTVN-RDTATLKHSDRTLNP 424
           S GN  ENK  K+P  SIY +                  G T    +    K SD   N 
Sbjct: 65  SRGNLCENKNWKKPNSSIYRSIKFLRDTRKVAYGGTCIRGHTDKYPNDPRCKKSDVIHNK 124

Query: 425 ELAILEEGE-SSSVMLNGH 478
             A+L +GE +SS  L GH
Sbjct: 125 VRAVLVDGEFASSNCLKGH 143


>AC024792-1|AAK84610.1|  938|Caenorhabditis elegans Importin beta
           family protein 5 protein.
          Length = 938

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 587 YAPRFLH--NLHHLVSDLASVEQKLGSIRLKSSS 682
           Y  +FL+  +L+HLV+ LAS+EQ     R +S S
Sbjct: 127 YLSKFLNGADLNHLVASLASMEQIFRKFRFESKS 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,758,965
Number of Sequences: 27780
Number of extensions: 373097
Number of successful extensions: 956
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)