Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP12_F_M09
(967 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.034
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.046
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.32
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 28 2.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 2.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.9
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 9.1
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 26 9.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.1
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 9.1
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXP 923
PP + P PPPPP PPP P+ PS P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAPLL 962
P PP P P P P+ P P P P +AP P L
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 33.1 bits (72), Expect = 0.060
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAPL 959
PP P P PP P PP P P P P+ P P A L
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPP---PLPASSAPSVPNPGDRSALL 1753
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXP--PPXPXPLXXPXPSPXXPXXXXPXTAPAPLL 962
P + P PP P P P P P P + P P TAP+ L
Sbjct: 1470 PAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTL 1519
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect(2) = 0.002
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXPXPS 911
P PPPPP P PP P PS
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPS 260
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXP 890
PPS A P P PPP P P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Score = 25.8 bits (54), Expect(2) = 0.002
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 822 PSXAXPXPPPPPXP 863
PS P PPPPP P
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.009
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 843 PPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAP 950
PPPPP P P P P+ P P+P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 34.3 bits (75), Expect = 0.026
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PP+ P P P P P PPP P + P P P P P P
Sbjct: 736 PPAVIVPTPAPAPIP-VPPPAPI-MGGPPPPPPPPGVAGAGPPPPP 779
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 846 PPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PPPP P P P P P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPP 767
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXP 938
P P PPP P PPP P P P P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXP 938
P PPP P P P P+ P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PP PPPP P P P P P APAP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 7/47 (14%)
Frame = +3
Query: 837 PXPPPP------PXPX-XPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
P PPPP P P P P P P+ P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.034
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Frame = +3
Query: 819 PPSXAXPXP------PPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPA 953
PPS A P P PP P P PP P P P P P AP+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 822 PSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAP 950
PS A P P P P P P P PS P P AP
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +3
Query: 822 PSXAXPXP------PPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPA 953
PS A P P PP P P PP P P P P P PA
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 819 PPSXAXPXPPPPP-XPXXPPPXPXPLXXPXPSPXXPXXXXPXTAP 950
P S P P P P PPP P P PS P P TAP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAP 1217
Score = 30.3 bits (65), Expect = 0.42
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPA 953
P A PP P P PP P P P P P AP+
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Score = 29.9 bits (64), Expect = 0.56
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 9/55 (16%)
Frame = +3
Query: 822 PSXAXPXP------PPPPXPXXPPPXPXP--LXXPXPSP-XXPXXXXPXTAPAPL 959
PS A P P PP P P PP P P P P+P P P A P+
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Score = 29.1 bits (62), Expect = 0.98
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXP-XXPPPXPXPLXXPXPSPXXPXXXXPXTAPA 953
PP A PP P P PP P P P P P P AP+
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAP-PVPKPSVAAPPVPAPS 1156
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +3
Query: 846 PPPPXPXXPPPXPXPL-XXPXPSPXXPXXXXPXTAPAP 956
PP P P PP P P P P P PAP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 8/54 (14%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXP------PPXPXP-LXXPXPSPXXPXXXXP-XTAPAP 956
P + P PPP P P PP P P P P+P P TA AP
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +3
Query: 822 PSXAXPXPPPPPXPXXPPPXPXPLXXPXPSP-XXPXXXXPXTAPAPL 959
PS A P P P P P P P P P P P P A P+
Sbjct: 1107 PSVAVP-PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXP-XXPPPXPXPLXXPXPSPXXPXXXXPXTAPA 953
PP PP P P PP P P P P P P AP+
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAP-PVPKPSVAAPPVPAPS 1175
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 8/52 (15%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXP--------XPLXXPXPSPXXPXXXXPXTAP 950
PP PP P P PP P P P PS P P AP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXP-PPXPXP--LXXPXPSP-XXPXXXXPXTAPAPL 959
PP A PP P P PP P P P P+P P P A P+
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV 1133
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAPL 959
P A P P P P P P P PS P P P+
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXP---XXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PP A PP P P P P P P P P P + AP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.046
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 822 PSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
P A PP PP PP P + P P P APAP
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +3
Query: 819 PPSXAXPXPPPPPX--PXXPP-PXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PPS PP P P PP P P+ P P+ P APAP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 30.3 bits (65), Expect = 0.42
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +3
Query: 819 PPSXAXPXPPP---PPXPXXPPPXPXPLXXPXPSPXXP 923
PPS P P P P PP P P P P+P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PP P PP P PP P L P+ P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXP-LXXPXPSPXXPXXXXPXTAP 950
P S + P P PP P PP P L P P P P ++P
Sbjct: 224 PTSTSAP-PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP 267
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
P PPPPP P P P P P T P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Frame = +3
Query: 819 PPSXAXPXPP-PPPXPXXPPPXPX-----PLXXPXPSPXXPXXXXPXTAPA 953
PP+ A P P PPP P PP P P P P+ P +AP+
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPL-XXPXPSPXXPXXXXPXTAPA 953
P S P PP P PPP P P +P P P PA
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +3
Query: 819 PPSXAXPXP-----PPPPXPXXPPPXP-XPLXXPXPSPXXPXXXXPXTAPAP 956
PPS A P PP P PP P P+ P +P P P P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 25.8 bits (54), Expect = 9.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PPS P PP P PP P P P P P + AP
Sbjct: 124 PPSA--PAPPTPQSELRPPTSAPP--RPSIPPPSPASAPPIPSKAP 165
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 819 PPSXAXPXPPPP--PXPXXPPPXPXP 890
PP P PPPP P PPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.74
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXP 902
P PPPPP PP P P P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 843 PPPPPXPXXPPPXPXPLXXPXPSP 914
PP P P PPP P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXPXPSP 914
P PPPP P PP P P P P
Sbjct: 6 PGNPPPPPP--PPGFEPPSQPPPPPP 29
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 837 PXPPPPPXPXXP-PPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
P P PP P P P P P P P P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 822 PSXAXPXPPPPPXPXXP-PPXPXPLXXPXPSPXXP 923
P P P PP P P P P P P P+ P
Sbjct: 113 PVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 843 PPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAP 956
PPP PP P P +P P APAP
Sbjct: 49 PPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAP 86
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 831 AXPXPPPPPXP 863
A P PPPPP P
Sbjct: 943 AFPPPPPPPPP 953
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 819 PPSXAXPXPPPPP 857
P P PPPPP
Sbjct: 899 PTIITHPTPPPPP 911
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 926 GXXGG*GRRXXERXGXWGXXXGXWGGGGXGXCXGGGXR 813
G G G R R G G G +GGG G GGG R
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGG-FGGGSR 175
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 819 PPSXAXPXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAP 950
P + + P PP P P P P P P P P AP
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPV-VPEAPSVPQPPVAP 611
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 9.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXP 890
P PPP P PP P P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 162 VFTKEPMVNLDMKMKELCIMKLLDHILQPTMFEDIKEIAKEYNIE 296
+ TK + + D K+K +++ L P+ I IAK+YN E
Sbjct: 1174 IMTKSVIEHTDKKVK----FWFIENFLSPSFKSSIPAIAKKYNFE 1214
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 843 PPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAPL 959
P P P P P P P P P P PAPL
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVR-SSISPSMPPAPL 762
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 837 PXPPPPPXPXXPPPXPXPLXXPXPSPXXPXXXXPXTAPAPLL 962
P PP P P+ P P P P P + P+P L
Sbjct: 134 PHSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNL 175
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,020,413
Number of Sequences: 5004
Number of extensions: 30388
Number of successful extensions: 354
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 495302128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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